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ds000001-mriqc/logs/duct/sub-16_2025.09.17T08.55.43-293025stdout
Felix Hoffstaedter 8d509af8ff [DATALAD RUNCMD] Compute MRIQC for sub-16 
=== Do not change lines below ===
{
 "chain": [],
 "cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-16 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports",
 "dsid": "e0514950-e780-4f0e-b0d2-b16e0a2cf2ea",
 "exit": 0,
 "extra_inputs": [
  "code/containers/images/bids/bids-mriqc--24.0.2.sing"
 ],
 "inputs": [
  "sourcedata/raw/sub-16",
  "sourcedata/raw/dataset_description.json"
 ],
 "outputs": [],
 "pwd": "."
}
^^^ Do not change lines above ^^^
2025-09-17 09:22:06 +02:00

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------------------------------------------------------------------
Running MRIQC version 24.1.0.dev0+gd5b13cb5.d20240826
----------------------------------------------------------------
NOTICE
Copyright © The NiPreps Developers.
This product includes software developed by
the NiPreps Community (https://nipreps.org/).
Portions of this software were developed at the Department of
Psychology at Stanford University, Stanford, CA, US.
This software contains code ultimately derived from the
PCP Quality Assessment Protocol (QAP;
http://preprocessed-connectomes-project.org/quality-assessment-protocol)
by C. Craddock, S. Giavasis, D. Clark, Z. Shezhad, and J. Pellman.
This software is also distributed as a Docker container image.
The bootstrapping file for the image ("Dockerfile") is licensed
under the MIT License.
----------------------------------------------------------------
* BIDS dataset path: /var/lib/condor/execute/dir_288342/ds/sourcedata/raw.
* Output folder: ..
* Analysis levels: ['participant'].
------------------------------------------------------------------
2025-09-17 06:55:45 | IMPORTANT | mriqc | Extracting metadata and entities for 1 input runs of modality 't1w'...
2025-09-17 06:55:45 | IMPORTANT | mriqc | File size ('t1w'): 0.01|0.01 GB [maximum|average].
2025-09-17 06:55:45 | IMPORTANT | mriqc | Extracting metadata and entities for 3 input runs of modality 'bold'...
2025-09-17 06:55:45 | IMPORTANT | mriqc | File size ('bold'): 0.05|0.05 GB [maximum|average].
2025-09-17 06:55:45 | INFO | mriqc | MRIQC config file: /tmp/config-20250917-065544_a2cf43f1-56f2-43b2-b279-3224869ddaa1.toml.
2025-09-17 06:55:49 | INFO | matplotlib.font_manager | generated new fontManager
2025-09-17 06:55:50 | IMPORTANT | mriqc | Building MRIQC's workflows...
2025-09-17 06:55:50 | INFO | nipype.workflow | Building functional MRIQC workflow for 3 BOLD runs..
2025-09-17 06:55:51 | INFO | nipype.workflow | Building anatomical MRIQC workflow for 1 NIfTI files..
2025-09-17 06:55:55 | IMPORTANT | mriqc | Workflow building finished (exit code 0).
2025-09-17 06:55:59 | INFO | nipype.workflow | Workflow mriqc_wf settings: ['check', 'execution', 'logging', 'monitoring']
2025-09-17 06:55:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/conform".
2025-09-17 06:55:59 | INFO | nipype.workflow | [Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
2025-09-17 06:55:59 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.281402s.
2025-09-17 06:56:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/pick_echo".
2025-09-17 06:56:01 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:56:01 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000111s.
2025-09-17 06:56:03 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/provenance/mapflow/_provenance0".
2025-09-17 06:56:03 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:56:03 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.07622s.
2025-09-17 06:56:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/pick_echo".
2025-09-17 06:56:03 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:56:03 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 9.3e-05s.
2025-09-17 06:56:05 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/provenance/mapflow/_provenance0".
2025-09-17 06:56:05 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:56:05 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.076533s.
2025-09-17 06:56:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/4becc9f30f6b2a477a420dbe78643e29091da189/pick_echo".
2025-09-17 06:56:05 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:56:05 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000108s.
2025-09-17 06:56:07 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/4becc9f30f6b2a477a420dbe78643e29091da189/provenance/mapflow/_provenance0".
2025-09-17 06:56:07 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:56:07 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.079184s.
2025-09-17 06:56:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/pre_clip".
2025-09-17 06:56:07 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 06:56:15 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 7.627057s.
2025-09-17 06:56:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/RotationMask".
2025-09-17 06:56:15 | INFO | nipype.workflow | [Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
2025-09-17 06:56:15 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 0.39815s.
2025-09-17 06:56:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/PlotMosaicNoise".
2025-09-17 06:56:17 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 06:56:21 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 3.934513s.
2025-09-17 06:56:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/non_steady_state_detector".
2025-09-17 06:56:23 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:56:23 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.192335s.
2025-09-17 06:56:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/non_steady_state_detector".
2025-09-17 06:56:25 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:56:25 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.190246s.
2025-09-17 06:56:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/4becc9f30f6b2a477a420dbe78643e29091da189/non_steady_state_detector".
2025-09-17 06:56:27 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:56:27 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.191864s.
2025-09-17 06:56:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/pre_n4".
2025-09-17 06:56:29 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 06:57:21 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 52.074091s.
2025-09-17 06:57:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/ds_report_background".
2025-09-17 06:57:23 | INFO | nipype.workflow | [Node] Executing "ds_report_background" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 06:57:23 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.006928s.
2025-09-17 06:57:23 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/sanitize/mapflow/_sanitize0".
2025-09-17 06:57:23 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:57:23 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.039348s.
2025-09-17 06:57:25 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/sanitize/mapflow/_sanitize0".
2025-09-17 06:57:25 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:57:27 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 2.112513s.
2025-09-17 06:57:29 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/4becc9f30f6b2a477a420dbe78643e29091da189/sanitize/mapflow/_sanitize0".
2025-09-17 06:57:29 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:57:29 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.039893s.
2025-09-17 06:57:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/synthstrip".
2025-09-17 06:57:31 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 06:58:10 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 38.869455s.
2025-09-17 06:58:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/estimate_hm".
2025-09-17 06:58:11 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:01:17 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 185.703401s.
2025-09-17 07:01:17 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:01:17 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:01:18 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.473782s.
2025-09-17 07:01:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/estimate_hm".
2025-09-17 07:01:19 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:04:22 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 183.301409s.
2025-09-17 07:04:23 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:04:23 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:04:24 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.382238s.
2025-09-17 07:04:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/4becc9f30f6b2a477a420dbe78643e29091da189/estimate_hm".
2025-09-17 07:04:25 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:07:27 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 182.049185s.
2025-09-17 07:07:29 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4becc9f30f6b2a477a420dbe78643e29091da189/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:07:29 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:07:30 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.4507050000000001s.
2025-09-17 07:07:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/post_n4".
2025-09-17 07:07:31 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:07:44 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 13.035775s.
2025-09-17 07:07:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/smoothness".
2025-09-17 07:07:45 | INFO | nipype.workflow | [Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:07:48 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 2.605064s.
2025-09-17 07:07:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/PlotMosaicZoomed".
2025-09-17 07:07:49 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:07:52 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 3.325668s.
2025-09-17 07:07:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/PlotBrainmask".
2025-09-17 07:07:53 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:07:55 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 2.246236s.
2025-09-17 07:07:57 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:07:57 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:08:11 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 14.432936s.
2025-09-17 07:08:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/ComputeFD".
2025-09-17 07:08:13 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:08:13 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.005446s.
2025-09-17 07:08:15 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:08:15 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:08:16 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.654353s.
2025-09-17 07:08:17 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:08:17 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:08:31 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 14.340275s.
2025-09-17 07:08:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/ComputeFD".
2025-09-17 07:08:33 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:08:33 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.005625s.
2025-09-17 07:08:35 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:08:35 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:08:36 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.621038s.
2025-09-17 07:08:37 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/4becc9f30f6b2a477a420dbe78643e29091da189/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:08:37 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:08:51 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 14.412044999999999s.
2025-09-17 07:08:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/4becc9f30f6b2a477a420dbe78643e29091da189/ComputeFD".
2025-09-17 07:08:53 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:08:53 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.003228s.
2025-09-17 07:08:55 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4becc9f30f6b2a477a420dbe78643e29091da189/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:08:55 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:08:56 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.681724s.
2025-09-17 07:08:57 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/final_masked".
2025-09-17 07:08:57 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:08:57 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.221795s.
2025-09-17 07:08:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization".
2025-09-17 07:08:59 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:09:00 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:09:50 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json.
2025-09-17 07:09:50 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:10:01 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:10:02 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images
2025-09-17 07:10:02 | INFO | niworkflows | Generating visual report
2025-09-17 07:10:16 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 76.796836s.
2025-09-17 07:10:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/ds_report_zoomed".
2025-09-17 07:10:17 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:10:17 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.003771s.
2025-09-17 07:10:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/ds_report_bmask".
2025-09-17 07:10:17 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:10:17 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003693s.
2025-09-17 07:10:17 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/mean/mapflow/_mean0".
2025-09-17 07:10:17 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:10:18 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.862029s.
2025-09-17 07:10:19 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:10:19 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:10:20 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.620878s.
2025-09-17 07:10:21 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/quality/mapflow/_quality0".
2025-09-17 07:10:21 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:10:23 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 2.044026s.
2025-09-17 07:10:25 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/mean/mapflow/_mean0".
2025-09-17 07:10:25 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:10:26 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.801979s.
2025-09-17 07:10:27 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:10:27 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:10:28 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.641612s.
2025-09-17 07:10:29 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/quality/mapflow/_quality0".
2025-09-17 07:10:29 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:10:31 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 2.017563s.
2025-09-17 07:10:33 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/4becc9f30f6b2a477a420dbe78643e29091da189/mean/mapflow/_mean0".
2025-09-17 07:10:33 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:10:34 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.82927s.
2025-09-17 07:10:35 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/4becc9f30f6b2a477a420dbe78643e29091da189/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:10:35 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:10:36 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.645138s.
2025-09-17 07:10:37 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/4becc9f30f6b2a477a420dbe78643e29091da189/quality/mapflow/_quality0".
2025-09-17 07:10:37 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:10:39 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 2.023641s.
2025-09-17 07:10:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/ds_report_norm".
2025-09-17 07:10:41 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:10:41 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.0038s.
2025-09-17 07:10:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/pre_clip".
2025-09-17 07:10:41 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:10:41 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.225043s.
2025-09-17 07:10:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/SharpenEPI".
2025-09-17 07:10:43 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:10:45 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.437483s.
2025-09-17 07:10:45 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:10:45 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:10:46 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.789235s.
2025-09-17 07:10:47 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:10:47 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:10:48 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.824334s.
2025-09-17 07:10:49 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:10:49 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:10:50 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.810646s.
2025-09-17 07:10:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/pre_clip".
2025-09-17 07:10:51 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:10:51 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.228388s.
2025-09-17 07:10:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/SharpenEPI".
2025-09-17 07:10:53 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:10:55 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.489243s.
2025-09-17 07:10:55 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:10:55 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:10:56 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.764813s.
2025-09-17 07:10:57 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:10:57 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:10:58 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.829315s.
2025-09-17 07:10:59 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:10:59 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:11:00 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.840038s.
2025-09-17 07:11:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/4becc9f30f6b2a477a420dbe78643e29091da189/pre_clip".
2025-09-17 07:11:01 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:11:01 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.257587s.
2025-09-17 07:11:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/4becc9f30f6b2a477a420dbe78643e29091da189/SharpenEPI".
2025-09-17 07:11:03 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:11:05 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.515496s.
2025-09-17 07:11:05 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4becc9f30f6b2a477a420dbe78643e29091da189/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:11:05 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:11:06 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.79664s.
2025-09-17 07:11:07 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4becc9f30f6b2a477a420dbe78643e29091da189/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:11:07 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:11:08 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 0.83942s.
2025-09-17 07:11:09 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4becc9f30f6b2a477a420dbe78643e29091da189/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:11:09 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:11:10 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 0.847748s.
2025-09-17 07:11:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/pre_n4".
2025-09-17 07:11:11 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:11:13 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.471251s.
2025-09-17 07:11:13 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:11:13 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:11:13 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.00414s.
2025-09-17 07:11:13 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:11:13 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:11:13 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004089s.
2025-09-17 07:11:13 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:11:13 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:11:13 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004087s.
2025-09-17 07:11:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/pre_n4".
2025-09-17 07:11:13 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:11:15 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.45086s.
2025-09-17 07:11:15 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:11:15 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:11:15 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004022s.
2025-09-17 07:11:15 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:11:15 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:11:15 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.00396s.
2025-09-17 07:11:15 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:11:15 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:11:15 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.00406s.
2025-09-17 07:11:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/4becc9f30f6b2a477a420dbe78643e29091da189/pre_n4".
2025-09-17 07:11:15 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:11:17 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.419411s.
2025-09-17 07:11:17 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4becc9f30f6b2a477a420dbe78643e29091da189/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:11:17 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:11:17 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.00395s.
2025-09-17 07:11:17 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4becc9f30f6b2a477a420dbe78643e29091da189/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:11:17 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:11:17 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.003989s.
2025-09-17 07:11:17 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4becc9f30f6b2a477a420dbe78643e29091da189/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:11:17 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:11:17 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.003949s.
2025-09-17 07:11:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/synthstrip".
2025-09-17 07:11:17 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:12:01 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 43.772087s.
2025-09-17 07:12:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/synthstrip".
2025-09-17 07:12:03 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:12:47 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 43.84239s.
2025-09-17 07:12:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/4becc9f30f6b2a477a420dbe78643e29091da189/synthstrip".
2025-09-17 07:12:47 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:13:31 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 43.759284s.
2025-09-17 07:13:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/post_n4".
2025-09-17 07:13:31 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:13:32 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.716568s.
2025-09-17 07:13:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/EPI2MNI".
2025-09-17 07:13:33 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:13:33 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:13:53 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/EPI2MNI/stderr.nipype-init).
2025-09-17 07:13:53 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:13:53 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/SharpenEPI/sub-16_task-balloonanalogrisktask_run-01_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/SharpenEPI/sub-16_task-balloonanalogrisktask_run-01_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/SharpenEPI/sub-16_task-balloonanalogrisktask_run-01_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:14:51 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:14:51 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:14:51 | INFO | niworkflows | Generating visual report
2025-09-17 07:15:05 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 91.664772s.
2025-09-17 07:15:05 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:15:05 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:15:11 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 5.980444s.
2025-09-17 07:15:13 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/smoothness/mapflow/_smoothness0".
2025-09-17 07:15:13 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:15:14 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.297559s.
2025-09-17 07:15:15 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/outliers/mapflow/_outliers0".
2025-09-17 07:15:15 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:15:16 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 1.135631s.
2025-09-17 07:15:17 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/gcor/mapflow/_gcor0".
2025-09-17 07:15:17 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:15:19 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.669698s.
2025-09-17 07:15:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/dilated_mask".
2025-09-17 07:15:19 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:15:19 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.012195s.
2025-09-17 07:15:21 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:15:21 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:15:22 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.833225s.
2025-09-17 07:15:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/PlotBrainmask".
2025-09-17 07:15:23 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:15:24 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.113825s.
2025-09-17 07:15:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/post_n4".
2025-09-17 07:15:25 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:15:26 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.749023s.
2025-09-17 07:15:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/EPI2MNI".
2025-09-17 07:15:27 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:15:27 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:15:48 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:15:48 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/SharpenEPI/sub-16_task-balloonanalogrisktask_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/SharpenEPI/sub-16_task-balloonanalogrisktask_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/SharpenEPI/sub-16_task-balloonanalogrisktask_run-02_bold_desc-realigned_valid_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:16:45 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:16:45 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:16:45 | INFO | niworkflows | Generating visual report
2025-09-17 07:16:59 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 91.454682s.
2025-09-17 07:16:59 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:16:59 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:17:05 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 5.972787s.
2025-09-17 07:17:07 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/smoothness/mapflow/_smoothness0".
2025-09-17 07:17:07 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:17:08 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.29593s.
2025-09-17 07:17:09 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/outliers/mapflow/_outliers0".
2025-09-17 07:17:09 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:17:10 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 1.116879s.
2025-09-17 07:17:11 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/gcor/mapflow/_gcor0".
2025-09-17 07:17:11 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:17:13 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.5659960000000002s.
2025-09-17 07:17:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/dilated_mask".
2025-09-17 07:17:13 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:17:13 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.012659s.
2025-09-17 07:17:15 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:17:15 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:17:16 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.83673s.
2025-09-17 07:17:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/PlotBrainmask".
2025-09-17 07:17:17 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:17:18 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.114992s.
2025-09-17 07:17:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/4becc9f30f6b2a477a420dbe78643e29091da189/post_n4".
2025-09-17 07:17:19 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:17:20 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.754372s.
2025-09-17 07:17:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/4becc9f30f6b2a477a420dbe78643e29091da189/EPI2MNI".
2025-09-17 07:17:21 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:17:21 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:17:41 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:17:41 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/4becc9f30f6b2a477a420dbe78643e29091da189/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/4becc9f30f6b2a477a420dbe78643e29091da189/SharpenEPI/sub-16_task-balloonanalogrisktask_run-03_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/4becc9f30f6b2a477a420dbe78643e29091da189/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/4becc9f30f6b2a477a420dbe78643e29091da189/SharpenEPI/sub-16_task-balloonanalogrisktask_run-03_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/4becc9f30f6b2a477a420dbe78643e29091da189/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/4becc9f30f6b2a477a420dbe78643e29091da189/SharpenEPI/sub-16_task-balloonanalogrisktask_run-03_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/4becc9f30f6b2a477a420dbe78643e29091da189/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:18:39 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:18:39 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/4becc9f30f6b2a477a420dbe78643e29091da189/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:18:39 | INFO | niworkflows | Generating visual report
2025-09-17 07:18:53 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 91.839911s.
2025-09-17 07:18:53 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/4becc9f30f6b2a477a420dbe78643e29091da189/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:18:53 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:18:59 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 5.964278s.
2025-09-17 07:19:01 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/4becc9f30f6b2a477a420dbe78643e29091da189/smoothness/mapflow/_smoothness0".
2025-09-17 07:19:01 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:19:02 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.29847s.
2025-09-17 07:19:03 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/4becc9f30f6b2a477a420dbe78643e29091da189/outliers/mapflow/_outliers0".
2025-09-17 07:19:03 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:19:04 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 1.123184s.
2025-09-17 07:19:05 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/4becc9f30f6b2a477a420dbe78643e29091da189/gcor/mapflow/_gcor0".
2025-09-17 07:19:05 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:19:07 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.582794s.
2025-09-17 07:19:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4becc9f30f6b2a477a420dbe78643e29091da189/dilated_mask".
2025-09-17 07:19:07 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:19:07 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.013544s.
2025-09-17 07:19:09 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4becc9f30f6b2a477a420dbe78643e29091da189/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:19:09 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:19:10 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.835799s.
2025-09-17 07:19:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4becc9f30f6b2a477a420dbe78643e29091da189/PlotBrainmask".
2025-09-17 07:19:11 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:19:12 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.123281s.
2025-09-17 07:19:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/final_masked".
2025-09-17 07:19:13 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:19:13 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.019368s.
2025-09-17 07:19:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/ResampleSegmentation".
2025-09-17 07:19:15 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:19:16 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.010664s.
2025-09-17 07:19:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/ds_report_norm".
2025-09-17 07:19:17 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:19:17 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004012s.
2025-09-17 07:19:17 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/measures/mapflow/_measures0".
2025-09-17 07:19:17 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:19:18 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.572772s.
2025-09-17 07:19:19 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/timeseries/mapflow/_timeseries0".
2025-09-17 07:19:19 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:19:19 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.019401s.
2025-09-17 07:19:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/subtract_mask".
2025-09-17 07:19:21 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:19:21 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.011127s.
2025-09-17 07:19:23 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:19:23 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:19:23 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004012s.
2025-09-17 07:19:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/ds_report_bmask".
2025-09-17 07:19:23 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:19:23 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004333s.
2025-09-17 07:19:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/final_masked".
2025-09-17 07:19:24 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:19:24 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.019538s.
2025-09-17 07:19:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/ResampleSegmentation".
2025-09-17 07:19:25 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:19:26 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.971899s.
2025-09-17 07:19:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/ds_report_norm".
2025-09-17 07:19:27 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:19:27 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.003985s.
2025-09-17 07:19:27 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/measures/mapflow/_measures0".
2025-09-17 07:19:27 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:19:28 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.534096s.
2025-09-17 07:19:29 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/timeseries/mapflow/_timeseries0".
2025-09-17 07:19:29 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:19:29 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.018024s.
2025-09-17 07:19:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/subtract_mask".
2025-09-17 07:19:31 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:19:31 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.010093s.
2025-09-17 07:19:33 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:19:33 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:19:33 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004087s.
2025-09-17 07:19:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/ds_report_bmask".
2025-09-17 07:19:33 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:19:33 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.012046s.
2025-09-17 07:19:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/4becc9f30f6b2a477a420dbe78643e29091da189/final_masked".
2025-09-17 07:19:34 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:19:34 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.019641s.
2025-09-17 07:19:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/4becc9f30f6b2a477a420dbe78643e29091da189/ResampleSegmentation".
2025-09-17 07:19:35 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:19:36 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 0.973397s.
2025-09-17 07:19:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4becc9f30f6b2a477a420dbe78643e29091da189/ds_report_norm".
2025-09-17 07:19:37 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:19:37 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.003951s.
2025-09-17 07:19:37 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/4becc9f30f6b2a477a420dbe78643e29091da189/measures/mapflow/_measures0".
2025-09-17 07:19:37 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:19:38 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.557229s.
2025-09-17 07:19:39 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/4becc9f30f6b2a477a420dbe78643e29091da189/timeseries/mapflow/_timeseries0".
2025-09-17 07:19:39 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:19:39 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.015372s.
2025-09-17 07:19:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4becc9f30f6b2a477a420dbe78643e29091da189/subtract_mask".
2025-09-17 07:19:41 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:19:41 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.012849s.
2025-09-17 07:19:43 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4becc9f30f6b2a477a420dbe78643e29091da189/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:19:43 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:19:43 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004009s.
2025-09-17 07:19:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4becc9f30f6b2a477a420dbe78643e29091da189/ds_report_bmask".
2025-09-17 07:19:43 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:19:43 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.003947s.
2025-09-17 07:19:44 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/datasink/mapflow/_datasink0".
2025-09-17 07:19:44 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:19:44 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000404s.
2025-09-17 07:19:44 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:19:44 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:19:44 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003564s.
2025-09-17 07:19:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/parcels".
2025-09-17 07:19:44 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:19:44 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.02254s.
2025-09-17 07:19:45 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/datasink/mapflow/_datasink0".
2025-09-17 07:19:45 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:19:45 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000329s.
2025-09-17 07:19:45 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:19:45 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:19:45 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003383s.
2025-09-17 07:19:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/parcels".
2025-09-17 07:19:46 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:19:46 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.014077s.
2025-09-17 07:19:47 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/4becc9f30f6b2a477a420dbe78643e29091da189/datasink/mapflow/_datasink0".
2025-09-17 07:19:47 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:19:47 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000311s.
2025-09-17 07:19:47 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/4becc9f30f6b2a477a420dbe78643e29091da189/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:19:47 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:19:47 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.003423s.
2025-09-17 07:19:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4becc9f30f6b2a477a420dbe78643e29091da189/parcels".
2025-09-17 07:19:48 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:19:48 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.010529s.
2025-09-17 07:19:49 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:19:49 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:19:53 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 3.894068s.
2025-09-17 07:19:55 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:19:55 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:19:59 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 3.865841s.
2025-09-17 07:19:59 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4becc9f30f6b2a477a420dbe78643e29091da189/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:19:59 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:20:03 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 4.064118s.
2025-09-17 07:20:05 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/faf76fc0a3cc94b75c8250aad7ebce597ae741d4/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:20:05 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:20:05 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.003959s.
2025-09-17 07:20:05 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/c991ae0de38c634f9c94a7b99013a58bc4d7ef7d/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:20:05 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:20:05 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004025s.
2025-09-17 07:20:06 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/4becc9f30f6b2a477a420dbe78643e29091da189/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:20:06 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:20:06 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004838s.
2025-09-17 07:20:06 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-09-17 07:20:06 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-09-17 07:20:10 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 4.456706s.
2025-09-17 07:20:11 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-09-17 07:20:11 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-09-17 07:20:16 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 4.508352s.
2025-09-17 07:20:17 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-09-17 07:20:17 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-09-17 07:20:22 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 4.481453s.
2025-09-17 07:20:23 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-09-17 07:20:23 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs
2025-09-17 07:20:23 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached.
2025-09-17 07:20:23 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-09-17 07:20:23 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs
2025-09-17 07:20:23 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached.
2025-09-17 07:20:23 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-09-17 07:20:23 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs
2025-09-17 07:20:23 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached.
2025-09-17 07:20:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/Enhance".
2025-09-17 07:20:25 | INFO | nipype.workflow | [Node] Executing "Enhance" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:20:26 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 0.49459s.
2025-09-17 07:20:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/format_tpm_names".
2025-09-17 07:20:27 | INFO | nipype.workflow | [Node] Executing "format_tpm_names" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:20:28 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 0.939774s.
2025-09-17 07:20:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/Grad".
2025-09-17 07:20:29 | INFO | nipype.workflow | [Node] Executing "Grad" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:20:31 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 1.327418s.
2025-09-17 07:20:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/apply_mask".
2025-09-17 07:20:31 | INFO | nipype.workflow | [Node] Executing "apply_mask" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:20:32 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.19953s.
2025-09-17 07:20:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/GradientThreshold".
2025-09-17 07:20:33 | INFO | nipype.workflow | [Node] Executing "GradientThreshold" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:20:38 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 4.350053s.
2025-09-17 07:20:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/segmentation".
2025-09-17 07:20:39 | INFO | nipype.workflow | [Node] Executing "segmentation" <nipype.interfaces.ants.segmentation.Atropos>
2025-09-17 07:21:24 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 45.075699s.
2025-09-17 07:21:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/ArtifactMask".
2025-09-17 07:21:25 | INFO | nipype.workflow | [Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
2025-09-17 07:21:27 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 1.332725s.
2025-09-17 07:21:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/PlotHeadmask".
2025-09-17 07:21:27 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:21:29 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 1.8851930000000001s.
2025-09-17 07:21:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/harmonize".
2025-09-17 07:21:29 | INFO | nipype.workflow | [Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
2025-09-17 07:21:30 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 0.586444s.
2025-09-17 07:21:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/PlotSegmentation".
2025-09-17 07:21:31 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:21:33 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 2.115408s.
2025-09-17 07:21:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/provenance".
2025-09-17 07:21:35 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 07:21:35 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.038713s.
2025-09-17 07:21:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/ComputeQI2".
2025-09-17 07:21:36 | INFO | nipype.workflow | [Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
2025-09-17 07:21:47 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 11.071468s.
2025-09-17 07:21:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotAirmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/PlotAirmask".
2025-09-17 07:21:47 | INFO | nipype.workflow | [Node] Executing "PlotAirmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:21:49 | INFO | nipype.workflow | [Node] Finished "PlotAirmask", elapsed time 1.891513s.
2025-09-17 07:21:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotArtmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/PlotArtmask".
2025-09-17 07:21:51 | INFO | nipype.workflow | [Node] Executing "PlotArtmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:21:53 | INFO | nipype.workflow | [Node] Finished "PlotArtmask", elapsed time 1.9001679999999999s.
2025-09-17 07:21:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_headmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/ds_report_headmask".
2025-09-17 07:21:55 | INFO | nipype.workflow | [Node] Executing "ds_report_headmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:21:55 | INFO | nipype.workflow | [Node] Finished "ds_report_headmask", elapsed time 0.003749s.
2025-09-17 07:21:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/measures".
2025-09-17 07:21:55 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
2025-09-17 07:21:57 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=28.2635)
2025-09-17 07:21:57 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=28.2635)
2025-09-17 07:21:57 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=28.2635)
2025-09-17 07:22:00 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 4.172376s.
2025-09-17 07:22:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_segm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/ds_report_segm".
2025-09-17 07:22:01 | INFO | nipype.workflow | [Node] Executing "ds_report_segm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:22:01 | INFO | nipype.workflow | [Node] Finished "ds_report_segm", elapsed time 0.003782s.
2025-09-17 07:22:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_noisefit" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/ds_report_noisefit".
2025-09-17 07:22:01 | INFO | nipype.workflow | [Node] Executing "ds_report_noisefit" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:22:01 | INFO | nipype.workflow | [Node] Finished "ds_report_noisefit", elapsed time 0.003786s.
2025-09-17 07:22:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_airmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/ds_report_airmask".
2025-09-17 07:22:02 | INFO | nipype.workflow | [Node] Executing "ds_report_airmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:22:02 | INFO | nipype.workflow | [Node] Finished "ds_report_airmask", elapsed time 0.003743s.
2025-09-17 07:22:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_artmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/ds_report_artmask".
2025-09-17 07:22:02 | INFO | nipype.workflow | [Node] Executing "ds_report_artmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:22:02 | INFO | nipype.workflow | [Node] Finished "ds_report_artmask", elapsed time 0.003619s.
2025-09-17 07:22:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject16.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_288342..ds..sourcedata..raw..sub-16..anat..sub-16_T1w.nii.gz_metadata_FileSize0.00540061853826046.FileSizeUnitsGB.NumberOfVolumes1/datasink".
2025-09-17 07:22:02 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:22:02 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000368s.
2025-09-17 07:22:03 | INFO | nipype.workflow | Generating reports...
2025-09-17 07:22:04 | INFO | nipype.workflow | Report generation finished (4 reports).
2025-09-17 07:22:04 | IMPORTANT | mriqc | Participant level finished successfully averaging 00h 06min 34s per subject.
2025-09-17 07:22:04 | INFO | mriqc | Generating BIDS derivatives metadata.
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MRIQC completed (elapsed time 00h 26min 19s).
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