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ds000001-mriqc/logs/duct/sub-15_2025.09.17T08.57.24-2164416stdout
Felix Hoffstaedter e5adbae7c2 [DATALAD RUNCMD] Compute MRIQC for sub-15 
=== Do not change lines below ===
{
 "chain": [],
 "cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-15 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports",
 "dsid": "e0514950-e780-4f0e-b0d2-b16e0a2cf2ea",
 "exit": 0,
 "extra_inputs": [
  "code/containers/images/bids/bids-mriqc--24.0.2.sing"
 ],
 "inputs": [
  "sourcedata/raw/sub-15",
  "sourcedata/raw/dataset_description.json"
 ],
 "outputs": [],
 "pwd": "."
}
^^^ Do not change lines above ^^^
2025-09-17 09:29:03 +02:00

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------------------------------------------------------------------
Running MRIQC version 24.1.0.dev0+gd5b13cb5.d20240826
----------------------------------------------------------------
NOTICE
Copyright © The NiPreps Developers.
This product includes software developed by
the NiPreps Community (https://nipreps.org/).
Portions of this software were developed at the Department of
Psychology at Stanford University, Stanford, CA, US.
This software contains code ultimately derived from the
PCP Quality Assessment Protocol (QAP;
http://preprocessed-connectomes-project.org/quality-assessment-protocol)
by C. Craddock, S. Giavasis, D. Clark, Z. Shezhad, and J. Pellman.
This software is also distributed as a Docker container image.
The bootstrapping file for the image ("Dockerfile") is licensed
under the MIT License.
----------------------------------------------------------------
* BIDS dataset path: /var/lib/condor/execute/dir_2132102/ds/sourcedata/raw.
* Output folder: ..
* Analysis levels: ['participant'].
------------------------------------------------------------------
2025-09-17 06:57:27 | IMPORTANT | mriqc | Extracting metadata and entities for 1 input runs of modality 't1w'...
2025-09-17 06:57:27 | IMPORTANT | mriqc | File size ('t1w'): 0.01|0.01 GB [maximum|average].
2025-09-17 06:57:27 | IMPORTANT | mriqc | Extracting metadata and entities for 3 input runs of modality 'bold'...
2025-09-17 06:57:27 | IMPORTANT | mriqc | File size ('bold'): 0.04|0.04 GB [maximum|average].
2025-09-17 06:57:27 | INFO | mriqc | MRIQC config file: /tmp/config-20250917-065725_adce369a-60b5-47aa-9a58-50c29760557e.toml.
2025-09-17 06:57:32 | INFO | matplotlib.font_manager | generated new fontManager
2025-09-17 06:57:33 | IMPORTANT | mriqc | Building MRIQC's workflows...
2025-09-17 06:57:34 | INFO | nipype.workflow | Building functional MRIQC workflow for 3 BOLD runs..
2025-09-17 06:57:35 | INFO | nipype.workflow | Building anatomical MRIQC workflow for 1 NIfTI files..
2025-09-17 06:57:39 | IMPORTANT | mriqc | Workflow building finished (exit code 0).
2025-09-17 06:57:44 | INFO | nipype.workflow | Workflow mriqc_wf settings: ['check', 'execution', 'logging', 'monitoring']
2025-09-17 06:57:44 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/conform".
2025-09-17 06:57:44 | INFO | nipype.workflow | [Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
2025-09-17 06:57:44 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.318954s.
2025-09-17 06:57:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/pick_echo".
2025-09-17 06:57:46 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:57:46 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000127s.
2025-09-17 06:57:48 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/provenance/mapflow/_provenance0".
2025-09-17 06:57:48 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:57:48 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.086046s.
2025-09-17 06:57:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/pick_echo".
2025-09-17 06:57:48 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:57:48 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000109s.
2025-09-17 06:57:50 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/provenance/mapflow/_provenance0".
2025-09-17 06:57:50 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:57:50 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.084662s.
2025-09-17 06:57:50 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/37b37b06a732e283cc8fec460ff859a3681b960b/pick_echo".
2025-09-17 06:57:50 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:57:50 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.00011s.
2025-09-17 06:57:52 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/37b37b06a732e283cc8fec460ff859a3681b960b/provenance/mapflow/_provenance0".
2025-09-17 06:57:52 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:57:52 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.085324s.
2025-09-17 06:57:52 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/pre_clip".
2025-09-17 06:57:52 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 06:58:02 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 9.370382s.
2025-09-17 06:58:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/RotationMask".
2025-09-17 06:58:02 | INFO | nipype.workflow | [Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
2025-09-17 06:58:02 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 0.40561s.
2025-09-17 06:58:04 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/PlotMosaicNoise".
2025-09-17 06:58:04 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 06:58:09 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 4.675063s.
2025-09-17 06:58:10 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/non_steady_state_detector".
2025-09-17 06:58:10 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:58:10 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.220904s.
2025-09-17 06:58:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/non_steady_state_detector".
2025-09-17 06:58:12 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:58:12 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.218082s.
2025-09-17 06:58:14 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/37b37b06a732e283cc8fec460ff859a3681b960b/non_steady_state_detector".
2025-09-17 06:58:14 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:58:14 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.219017s.
2025-09-17 06:58:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/pre_n4".
2025-09-17 06:58:16 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 06:59:21 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 64.603886s.
2025-09-17 06:59:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/ds_report_background".
2025-09-17 06:59:22 | INFO | nipype.workflow | [Node] Executing "ds_report_background" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 06:59:22 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.010612s.
2025-09-17 06:59:22 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/sanitize/mapflow/_sanitize0".
2025-09-17 06:59:22 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:59:22 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.050196s.
2025-09-17 06:59:24 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/sanitize/mapflow/_sanitize0".
2025-09-17 06:59:24 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:59:24 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.050004s.
2025-09-17 06:59:26 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/37b37b06a732e283cc8fec460ff859a3681b960b/sanitize/mapflow/_sanitize0".
2025-09-17 06:59:26 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:59:26 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.048232s.
2025-09-17 06:59:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/synthstrip".
2025-09-17 06:59:28 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:00:17 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 48.435692s.
2025-09-17 07:00:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/estimate_hm".
2025-09-17 07:00:18 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:04:05 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 227.266313s.
2025-09-17 07:04:06 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:04:06 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:04:08 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.608258s.
2025-09-17 07:04:08 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/estimate_hm".
2025-09-17 07:04:08 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:07:52 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 224.010803s.
2025-09-17 07:07:54 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:07:54 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:07:56 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.619526s.
2025-09-17 07:07:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/37b37b06a732e283cc8fec460ff859a3681b960b/estimate_hm".
2025-09-17 07:07:56 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:11:43 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 227.031157s.
2025-09-17 07:11:44 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/37b37b06a732e283cc8fec460ff859a3681b960b/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:11:44 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:11:46 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.6445509999999999s.
2025-09-17 07:11:46 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/post_n4".
2025-09-17 07:11:46 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:12:00 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 14.107636s.
2025-09-17 07:12:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/smoothness".
2025-09-17 07:12:02 | INFO | nipype.workflow | [Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:12:05 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 2.742381s.
2025-09-17 07:12:06 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/PlotMosaicZoomed".
2025-09-17 07:12:06 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:12:10 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 4.011512s.
2025-09-17 07:12:12 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/PlotBrainmask".
2025-09-17 07:12:12 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:12:15 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 2.679779s.
2025-09-17 07:12:16 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:12:16 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:12:33 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 16.251009s.
2025-09-17 07:12:34 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/ComputeFD".
2025-09-17 07:12:34 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:12:34 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.006535s.
2025-09-17 07:12:36 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:12:36 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:12:37 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.819343s.
2025-09-17 07:12:38 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:12:38 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:12:55 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 16.293123s.
2025-09-17 07:12:56 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/ComputeFD".
2025-09-17 07:12:56 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:12:56 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.006746s.
2025-09-17 07:12:58 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:12:58 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:12:59 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.828703s.
2025-09-17 07:13:00 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/37b37b06a732e283cc8fec460ff859a3681b960b/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:13:00 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:13:17 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 16.500864s.
2025-09-17 07:13:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/37b37b06a732e283cc8fec460ff859a3681b960b/ComputeFD".
2025-09-17 07:13:18 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:13:18 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.003652s.
2025-09-17 07:13:20 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/37b37b06a732e283cc8fec460ff859a3681b960b/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:13:20 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:13:21 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.775549s.
2025-09-17 07:13:22 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/final_masked".
2025-09-17 07:13:22 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:13:23 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.229965s.
2025-09-17 07:13:24 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization".
2025-09-17 07:13:24 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:13:25 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:14:29 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json.
2025-09-17 07:14:29 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:14:44 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:14:45 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images
2025-09-17 07:14:45 | INFO | niworkflows | Generating visual report
2025-09-17 07:15:02 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 97.491791s.
2025-09-17 07:15:02 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/ds_report_zoomed".
2025-09-17 07:15:03 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:15:03 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.004713s.
2025-09-17 07:15:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/ds_report_bmask".
2025-09-17 07:15:03 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:15:03 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004552s.
2025-09-17 07:15:03 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/mean/mapflow/_mean0".
2025-09-17 07:15:03 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:15:04 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.982758s.
2025-09-17 07:15:05 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:15:05 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:15:05 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.722666s.
2025-09-17 07:15:07 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/quality/mapflow/_quality0".
2025-09-17 07:15:07 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:15:09 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 2.234897s.
2025-09-17 07:15:11 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/mean/mapflow/_mean0".
2025-09-17 07:15:11 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:15:11 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.937963s.
2025-09-17 07:15:12 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:15:12 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:15:13 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.742331s.
2025-09-17 07:15:15 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/quality/mapflow/_quality0".
2025-09-17 07:15:15 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:15:17 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 2.241636s.
2025-09-17 07:15:18 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/37b37b06a732e283cc8fec460ff859a3681b960b/mean/mapflow/_mean0".
2025-09-17 07:15:18 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:15:19 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.924087s.
2025-09-17 07:15:21 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/37b37b06a732e283cc8fec460ff859a3681b960b/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:15:21 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:15:21 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.760153s.
2025-09-17 07:15:23 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/37b37b06a732e283cc8fec460ff859a3681b960b/quality/mapflow/_quality0".
2025-09-17 07:15:23 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:15:25 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 2.211236s.
2025-09-17 07:15:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/ds_report_norm".
2025-09-17 07:15:26 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:15:27 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004618s.
2025-09-17 07:15:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/pre_clip".
2025-09-17 07:15:27 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:15:27 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.276555s.
2025-09-17 07:15:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/SharpenEPI".
2025-09-17 07:15:29 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:15:30 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.756901s.
2025-09-17 07:15:31 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:15:31 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:15:32 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 1.117549s.
2025-09-17 07:15:33 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:15:33 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:15:34 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 1.115482s.
2025-09-17 07:15:35 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:15:35 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:15:36 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 1.306305s.
2025-09-17 07:15:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/pre_clip".
2025-09-17 07:15:37 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:15:37 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.316303s.
2025-09-17 07:15:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/SharpenEPI".
2025-09-17 07:15:39 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:15:40 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.902276s.
2025-09-17 07:15:43 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:15:43 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:15:44 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 1.100509s.
2025-09-17 07:15:45 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:15:45 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:15:46 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 1.127251s.
2025-09-17 07:15:47 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:15:47 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:15:48 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 1.17026s.
2025-09-17 07:15:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/37b37b06a732e283cc8fec460ff859a3681b960b/pre_clip".
2025-09-17 07:15:49 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:15:49 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.280789s.
2025-09-17 07:15:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/37b37b06a732e283cc8fec460ff859a3681b960b/SharpenEPI".
2025-09-17 07:15:51 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:15:52 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.904058s.
2025-09-17 07:15:55 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/37b37b06a732e283cc8fec460ff859a3681b960b/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:15:55 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:15:56 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 1.102465s.
2025-09-17 07:15:57 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/37b37b06a732e283cc8fec460ff859a3681b960b/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:15:57 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:15:58 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 1.094311s.
2025-09-17 07:15:59 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/37b37b06a732e283cc8fec460ff859a3681b960b/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:15:59 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:16:00 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 1.122308s.
2025-09-17 07:16:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/pre_n4".
2025-09-17 07:16:01 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:16:02 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.816315s.
2025-09-17 07:16:03 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:16:03 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:16:03 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.005922s.
2025-09-17 07:16:03 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:16:03 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:16:03 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.005589s.
2025-09-17 07:16:03 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:16:03 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:16:03 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.005906s.
2025-09-17 07:16:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/pre_n4".
2025-09-17 07:16:03 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:16:05 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.7386439999999999s.
2025-09-17 07:16:07 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:16:07 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:16:07 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004954s.
2025-09-17 07:16:07 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:16:07 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:16:07 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.005157s.
2025-09-17 07:16:07 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:16:07 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:16:07 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004956s.
2025-09-17 07:16:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/37b37b06a732e283cc8fec460ff859a3681b960b/pre_n4".
2025-09-17 07:16:07 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:16:09 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.704823s.
2025-09-17 07:16:11 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/37b37b06a732e283cc8fec460ff859a3681b960b/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:16:11 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:16:11 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004849s.
2025-09-17 07:16:11 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/37b37b06a732e283cc8fec460ff859a3681b960b/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:16:11 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:16:11 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004806s.
2025-09-17 07:16:11 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/37b37b06a732e283cc8fec460ff859a3681b960b/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:16:11 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:16:11 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004804s.
2025-09-17 07:16:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/synthstrip".
2025-09-17 07:16:11 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:17:03 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 52.491823s.
2025-09-17 07:17:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/synthstrip".
2025-09-17 07:17:05 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:17:57 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 52.073651s.
2025-09-17 07:17:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/37b37b06a732e283cc8fec460ff859a3681b960b/synthstrip".
2025-09-17 07:17:59 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:18:52 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 53.65287s.
2025-09-17 07:18:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/post_n4".
2025-09-17 07:18:53 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:18:53 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.861321s.
2025-09-17 07:18:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/EPI2MNI".
2025-09-17 07:18:55 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:18:55 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:19:23 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/EPI2MNI/stderr.nipype-init).
2025-09-17 07:19:23 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:19:23 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/SharpenEPI/sub-15_task-balloonanalogrisktask_run-01_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/SharpenEPI/sub-15_task-balloonanalogrisktask_run-01_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/SharpenEPI/sub-15_task-balloonanalogrisktask_run-01_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:20:40 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:20:40 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:20:40 | INFO | niworkflows | Generating visual report
2025-09-17 07:20:59 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 124.567635s.
2025-09-17 07:21:01 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:21:01 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:21:07 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 6.423549s.
2025-09-17 07:21:09 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/smoothness/mapflow/_smoothness0".
2025-09-17 07:21:09 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:21:09 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.330654s.
2025-09-17 07:21:11 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/outliers/mapflow/_outliers0".
2025-09-17 07:21:11 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:21:12 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 1.333807s.
2025-09-17 07:21:13 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/gcor/mapflow/_gcor0".
2025-09-17 07:21:13 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:21:15 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 2.130602s.
2025-09-17 07:21:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/dilated_mask".
2025-09-17 07:21:17 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:21:17 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.016152s.
2025-09-17 07:21:19 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:21:19 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:21:20 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 1.125076s.
2025-09-17 07:21:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/PlotBrainmask".
2025-09-17 07:21:21 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:21:22 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.728698s.
2025-09-17 07:21:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/post_n4".
2025-09-17 07:21:23 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:21:24 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.998542s.
2025-09-17 07:21:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/EPI2MNI".
2025-09-17 07:21:25 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:21:25 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:21:55 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/EPI2MNI/stderr.nipype-init).
2025-09-17 07:21:55 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:21:55 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/SharpenEPI/sub-15_task-balloonanalogrisktask_run-02_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/SharpenEPI/sub-15_task-balloonanalogrisktask_run-02_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/SharpenEPI/sub-15_task-balloonanalogrisktask_run-02_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:23:09 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:23:09 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:23:09 | INFO | niworkflows | Generating visual report
2025-09-17 07:23:28 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 122.824605s.
2025-09-17 07:23:29 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:23:29 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:23:35 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 6.18319s.
2025-09-17 07:23:37 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/smoothness/mapflow/_smoothness0".
2025-09-17 07:23:37 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:23:37 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.285889s.
2025-09-17 07:23:39 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/outliers/mapflow/_outliers0".
2025-09-17 07:23:39 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:23:40 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 1.178099s.
2025-09-17 07:23:41 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/gcor/mapflow/_gcor0".
2025-09-17 07:23:41 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:23:43 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.842366s.
2025-09-17 07:23:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/dilated_mask".
2025-09-17 07:23:43 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:23:43 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.010245s.
2025-09-17 07:23:45 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:23:45 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:23:46 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 1.032245s.
2025-09-17 07:23:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/PlotBrainmask".
2025-09-17 07:23:47 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:23:48 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.374022s.
2025-09-17 07:23:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/37b37b06a732e283cc8fec460ff859a3681b960b/post_n4".
2025-09-17 07:23:49 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:23:50 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.827526s.
2025-09-17 07:23:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/37b37b06a732e283cc8fec460ff859a3681b960b/EPI2MNI".
2025-09-17 07:23:51 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:23:51 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:24:17 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/37b37b06a732e283cc8fec460ff859a3681b960b/EPI2MNI/stderr.nipype-init).
2025-09-17 07:24:17 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:24:17 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/37b37b06a732e283cc8fec460ff859a3681b960b/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/37b37b06a732e283cc8fec460ff859a3681b960b/SharpenEPI/sub-15_task-balloonanalogrisktask_run-03_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/37b37b06a732e283cc8fec460ff859a3681b960b/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/37b37b06a732e283cc8fec460ff859a3681b960b/SharpenEPI/sub-15_task-balloonanalogrisktask_run-03_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/37b37b06a732e283cc8fec460ff859a3681b960b/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/37b37b06a732e283cc8fec460ff859a3681b960b/SharpenEPI/sub-15_task-balloonanalogrisktask_run-03_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/37b37b06a732e283cc8fec460ff859a3681b960b/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:25:26 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:25:26 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/37b37b06a732e283cc8fec460ff859a3681b960b/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:25:26 | INFO | niworkflows | Generating visual report
2025-09-17 07:25:43 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 112.477876s.
2025-09-17 07:25:45 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/37b37b06a732e283cc8fec460ff859a3681b960b/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:25:45 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:25:51 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 6.018437s.
2025-09-17 07:25:53 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/37b37b06a732e283cc8fec460ff859a3681b960b/smoothness/mapflow/_smoothness0".
2025-09-17 07:25:53 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:25:53 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.264116s.
2025-09-17 07:25:55 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/37b37b06a732e283cc8fec460ff859a3681b960b/outliers/mapflow/_outliers0".
2025-09-17 07:25:55 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:25:56 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 1.209462s.
2025-09-17 07:25:57 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/37b37b06a732e283cc8fec460ff859a3681b960b/gcor/mapflow/_gcor0".
2025-09-17 07:25:57 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:25:59 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.812434s.
2025-09-17 07:25:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/37b37b06a732e283cc8fec460ff859a3681b960b/dilated_mask".
2025-09-17 07:25:59 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:25:59 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.015713s.
2025-09-17 07:26:01 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/37b37b06a732e283cc8fec460ff859a3681b960b/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:26:01 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:26:02 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 1.018122s.
2025-09-17 07:26:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/37b37b06a732e283cc8fec460ff859a3681b960b/PlotBrainmask".
2025-09-17 07:26:03 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:26:04 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.455406s.
2025-09-17 07:26:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/final_masked".
2025-09-17 07:26:05 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:26:05 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.023569s.
2025-09-17 07:26:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/ResampleSegmentation".
2025-09-17 07:26:07 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:26:08 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.130392s.
2025-09-17 07:26:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/ds_report_norm".
2025-09-17 07:26:09 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:26:09 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.005107s.
2025-09-17 07:26:09 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/measures/mapflow/_measures0".
2025-09-17 07:26:09 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:26:10 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.700491s.
2025-09-17 07:26:11 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/timeseries/mapflow/_timeseries0".
2025-09-17 07:26:11 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:26:11 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.018762s.
2025-09-17 07:26:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/subtract_mask".
2025-09-17 07:26:13 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:26:13 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.017164s.
2025-09-17 07:26:15 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:26:15 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:26:15 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004777s.
2025-09-17 07:26:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/ds_report_bmask".
2025-09-17 07:26:15 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:26:15 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004772s.
2025-09-17 07:26:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/final_masked".
2025-09-17 07:26:15 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:26:15 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.022881s.
2025-09-17 07:26:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/ResampleSegmentation".
2025-09-17 07:26:17 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:26:18 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.068745s.
2025-09-17 07:26:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/ds_report_norm".
2025-09-17 07:26:19 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:26:19 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.00499s.
2025-09-17 07:26:19 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/measures/mapflow/_measures0".
2025-09-17 07:26:19 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:26:20 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.614507s.
2025-09-17 07:26:21 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/timeseries/mapflow/_timeseries0".
2025-09-17 07:26:21 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:26:21 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.022746s.
2025-09-17 07:26:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/subtract_mask".
2025-09-17 07:26:23 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:26:23 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.016626s.
2025-09-17 07:26:25 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:26:25 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:26:25 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004862s.
2025-09-17 07:26:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/ds_report_bmask".
2025-09-17 07:26:25 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:26:25 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.006905s.
2025-09-17 07:26:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/37b37b06a732e283cc8fec460ff859a3681b960b/final_masked".
2025-09-17 07:26:25 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:26:25 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.022104s.
2025-09-17 07:26:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/37b37b06a732e283cc8fec460ff859a3681b960b/ResampleSegmentation".
2025-09-17 07:26:27 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:26:28 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.029746s.
2025-09-17 07:26:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/37b37b06a732e283cc8fec460ff859a3681b960b/ds_report_norm".
2025-09-17 07:26:29 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:26:29 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004845s.
2025-09-17 07:26:29 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/37b37b06a732e283cc8fec460ff859a3681b960b/measures/mapflow/_measures0".
2025-09-17 07:26:29 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:26:30 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.63672s.
2025-09-17 07:26:31 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/37b37b06a732e283cc8fec460ff859a3681b960b/timeseries/mapflow/_timeseries0".
2025-09-17 07:26:31 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:26:31 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.018026s.
2025-09-17 07:26:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/37b37b06a732e283cc8fec460ff859a3681b960b/subtract_mask".
2025-09-17 07:26:33 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:26:33 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.013761s.
2025-09-17 07:26:35 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/37b37b06a732e283cc8fec460ff859a3681b960b/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:26:35 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:26:35 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004785s.
2025-09-17 07:26:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/37b37b06a732e283cc8fec460ff859a3681b960b/ds_report_bmask".
2025-09-17 07:26:35 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:26:35 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004793s.
2025-09-17 07:26:35 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/datasink/mapflow/_datasink0".
2025-09-17 07:26:35 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:26:35 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000522s.
2025-09-17 07:26:35 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:26:35 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:26:35 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004197s.
2025-09-17 07:26:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/parcels".
2025-09-17 07:26:35 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:26:35 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.017733s.
2025-09-17 07:26:37 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/datasink/mapflow/_datasink0".
2025-09-17 07:26:37 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:26:37 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000382s.
2025-09-17 07:26:37 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:26:37 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:26:37 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004013s.
2025-09-17 07:26:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/parcels".
2025-09-17 07:26:37 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:26:37 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.017149s.
2025-09-17 07:26:39 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/37b37b06a732e283cc8fec460ff859a3681b960b/datasink/mapflow/_datasink0".
2025-09-17 07:26:39 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:26:39 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000377s.
2025-09-17 07:26:39 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/37b37b06a732e283cc8fec460ff859a3681b960b/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:26:39 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:26:39 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004045s.
2025-09-17 07:26:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/37b37b06a732e283cc8fec460ff859a3681b960b/parcels".
2025-09-17 07:26:39 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:26:39 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.014599s.
2025-09-17 07:26:41 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:26:41 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:26:45 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 4.289183s.
2025-09-17 07:26:47 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:26:47 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:26:51 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 4.248501s.
2025-09-17 07:26:53 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/37b37b06a732e283cc8fec460ff859a3681b960b/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:26:53 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:26:57 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 4.420718s.
2025-09-17 07:26:59 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/5b9e4dfd8f5c71c6a0b8f5ca0cf1e4694602d80a/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:26:59 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:26:59 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004718s.
2025-09-17 07:26:59 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/d97c0abf78ed9c5c74a3e8c81e8e845476764cc2/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:26:59 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:26:59 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.00469s.
2025-09-17 07:26:59 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/37b37b06a732e283cc8fec460ff859a3681b960b/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:26:59 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:26:59 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004468s.
2025-09-17 07:26:59 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-09-17 07:26:59 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-09-17 07:27:04 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 4.801315s.
2025-09-17 07:27:05 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-09-17 07:27:05 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-09-17 07:27:10 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 4.838862s.
2025-09-17 07:27:11 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-09-17 07:27:11 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-09-17 07:27:16 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 4.807554s.
2025-09-17 07:27:17 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-09-17 07:27:17 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs
2025-09-17 07:27:17 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached.
2025-09-17 07:27:17 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-09-17 07:27:17 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs
2025-09-17 07:27:17 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached.
2025-09-17 07:27:17 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-09-17 07:27:17 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs
2025-09-17 07:27:17 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached.
2025-09-17 07:27:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/Enhance".
2025-09-17 07:27:19 | INFO | nipype.workflow | [Node] Executing "Enhance" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:27:19 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 0.568829s.
2025-09-17 07:27:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/format_tpm_names".
2025-09-17 07:27:21 | INFO | nipype.workflow | [Node] Executing "format_tpm_names" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:27:22 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 0.947708s.
2025-09-17 07:27:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/Grad".
2025-09-17 07:27:23 | INFO | nipype.workflow | [Node] Executing "Grad" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:27:24 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 1.541741s.
2025-09-17 07:27:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/apply_mask".
2025-09-17 07:27:25 | INFO | nipype.workflow | [Node] Executing "apply_mask" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:27:25 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.223083s.
2025-09-17 07:27:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/GradientThreshold".
2025-09-17 07:27:27 | INFO | nipype.workflow | [Node] Executing "GradientThreshold" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:27:32 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 5.071109s.
2025-09-17 07:27:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/segmentation".
2025-09-17 07:27:33 | INFO | nipype.workflow | [Node] Executing "segmentation" <nipype.interfaces.ants.segmentation.Atropos>
2025-09-17 07:28:19 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 45.819644s.
2025-09-17 07:28:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/ArtifactMask".
2025-09-17 07:28:19 | INFO | nipype.workflow | [Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
2025-09-17 07:28:20 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 1.563729s.
2025-09-17 07:28:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/PlotHeadmask".
2025-09-17 07:28:21 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:28:23 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 2.156706s.
2025-09-17 07:28:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/harmonize".
2025-09-17 07:28:25 | INFO | nipype.workflow | [Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
2025-09-17 07:28:26 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 0.72207s.
2025-09-17 07:28:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/PlotSegmentation".
2025-09-17 07:28:27 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:28:29 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 2.457551s.
2025-09-17 07:28:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/provenance".
2025-09-17 07:28:31 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 07:28:31 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.0446s.
2025-09-17 07:28:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/ComputeQI2".
2025-09-17 07:28:31 | INFO | nipype.workflow | [Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
2025-09-17 07:28:44 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 13.146362s.
2025-09-17 07:28:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotAirmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/PlotAirmask".
2025-09-17 07:28:45 | INFO | nipype.workflow | [Node] Executing "PlotAirmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:28:47 | INFO | nipype.workflow | [Node] Finished "PlotAirmask", elapsed time 2.162337s.
2025-09-17 07:28:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotArtmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/PlotArtmask".
2025-09-17 07:28:49 | INFO | nipype.workflow | [Node] Executing "PlotArtmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:28:51 | INFO | nipype.workflow | [Node] Finished "PlotArtmask", elapsed time 2.142064s.
2025-09-17 07:28:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_headmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/ds_report_headmask".
2025-09-17 07:28:53 | INFO | nipype.workflow | [Node] Executing "ds_report_headmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:28:53 | INFO | nipype.workflow | [Node] Finished "ds_report_headmask", elapsed time 0.004366s.
2025-09-17 07:28:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/measures".
2025-09-17 07:28:53 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
2025-09-17 07:28:58 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 4.898227s.
2025-09-17 07:28:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_segm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/ds_report_segm".
2025-09-17 07:28:59 | INFO | nipype.workflow | [Node] Executing "ds_report_segm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:28:59 | INFO | nipype.workflow | [Node] Finished "ds_report_segm", elapsed time 0.004314s.
2025-09-17 07:28:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_noisefit" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/ds_report_noisefit".
2025-09-17 07:28:59 | INFO | nipype.workflow | [Node] Executing "ds_report_noisefit" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:28:59 | INFO | nipype.workflow | [Node] Finished "ds_report_noisefit", elapsed time 0.004416s.
2025-09-17 07:28:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_airmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/ds_report_airmask".
2025-09-17 07:28:59 | INFO | nipype.workflow | [Node] Executing "ds_report_airmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:28:59 | INFO | nipype.workflow | [Node] Finished "ds_report_airmask", elapsed time 0.004397s.
2025-09-17 07:28:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_artmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/ds_report_artmask".
2025-09-17 07:28:59 | INFO | nipype.workflow | [Node] Executing "ds_report_artmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:28:59 | INFO | nipype.workflow | [Node] Finished "ds_report_artmask", elapsed time 0.004299s.
2025-09-17 07:28:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject15.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132102..ds..sourcedata..raw..sub-15..anat..sub-15_T1w.nii.gz_metadata_FileSize0.0051307957619428635.FileSizeUnitsGB.NumberOfVolumes1/datasink".
2025-09-17 07:28:59 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:28:59 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.000421s.
2025-09-17 07:29:01 | INFO | nipype.workflow | Generating reports...
2025-09-17 07:29:02 | INFO | nipype.workflow | Report generation finished (4 reports).
2025-09-17 07:29:02 | IMPORTANT | mriqc | Participant level finished successfully averaging 00h 07min 54s per subject.
2025-09-17 07:29:02 | INFO | mriqc | Generating BIDS derivatives metadata.
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MRIQC completed (elapsed time 00h 31min 36s).
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