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ds000001-mriqc/logs/duct/sub-06_2025.09.17T08.56.38-2162099stdout
Felix Hoffstaedter ac96956bee [DATALAD RUNCMD] Compute MRIQC for sub-06 
=== Do not change lines below ===
{
 "chain": [],
 "cmd": "./code/containers/scripts/singularity_cmd exec code/containers/images/bids/bids-mriqc--24.0.2.sing mriqc sourcedata/raw . participant --participant-label sub-06 --no-datalad-get --no-sub --verbose --nprocs 1 --mem 3000 --work-dir /tmp --float32 --verbose-reports",
 "dsid": "e0514950-e780-4f0e-b0d2-b16e0a2cf2ea",
 "exit": 0,
 "extra_inputs": [
  "code/containers/images/bids/bids-mriqc--24.0.2.sing"
 ],
 "inputs": [
  "sourcedata/raw/sub-06",
  "sourcedata/raw/dataset_description.json"
 ],
 "outputs": [],
 "pwd": "."
}
^^^ Do not change lines above ^^^
2025-09-17 09:28:20 +02:00

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------------------------------------------------------------------
Running MRIQC version 24.1.0.dev0+gd5b13cb5.d20240826
----------------------------------------------------------------
NOTICE
Copyright © The NiPreps Developers.
This product includes software developed by
the NiPreps Community (https://nipreps.org/).
Portions of this software were developed at the Department of
Psychology at Stanford University, Stanford, CA, US.
This software contains code ultimately derived from the
PCP Quality Assessment Protocol (QAP;
http://preprocessed-connectomes-project.org/quality-assessment-protocol)
by C. Craddock, S. Giavasis, D. Clark, Z. Shezhad, and J. Pellman.
This software is also distributed as a Docker container image.
The bootstrapping file for the image ("Dockerfile") is licensed
under the MIT License.
----------------------------------------------------------------
* BIDS dataset path: /var/lib/condor/execute/dir_2132092/ds/sourcedata/raw.
* Output folder: ..
* Analysis levels: ['participant'].
------------------------------------------------------------------
2025-09-17 06:56:42 | IMPORTANT | mriqc | Extracting metadata and entities for 1 input runs of modality 't1w'...
2025-09-17 06:56:42 | IMPORTANT | mriqc | File size ('t1w'): 0.01|0.01 GB [maximum|average].
2025-09-17 06:56:42 | IMPORTANT | mriqc | Extracting metadata and entities for 3 input runs of modality 'bold'...
2025-09-17 06:56:42 | IMPORTANT | mriqc | File size ('bold'): 0.04|0.04 GB [maximum|average].
2025-09-17 06:56:42 | INFO | mriqc | MRIQC config file: /tmp/config-20250917-065639_53c54b78-3ec9-4644-979a-0082a97cdbcc.toml.
2025-09-17 06:56:47 | INFO | matplotlib.font_manager | generated new fontManager
2025-09-17 06:56:48 | IMPORTANT | mriqc | Building MRIQC's workflows...
2025-09-17 06:56:48 | INFO | nipype.workflow | Building functional MRIQC workflow for 3 BOLD runs..
2025-09-17 06:56:49 | INFO | nipype.workflow | Building anatomical MRIQC workflow for 1 NIfTI files..
2025-09-17 06:56:54 | IMPORTANT | mriqc | Workflow building finished (exit code 0).
2025-09-17 06:56:58 | INFO | nipype.workflow | Workflow mriqc_wf settings: ['check', 'execution', 'logging', 'monitoring']
2025-09-17 06:56:58 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/tmp/mriqc_wf/anatMRIQC/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/conform".
2025-09-17 06:56:58 | INFO | nipype.workflow | [Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
2025-09-17 06:56:59 | INFO | nipype.workflow | [Node] Finished "conform", elapsed time 0.345493s.
2025-09-17 06:57:00 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/cdac55591258580df0c9c8ad467811bb47a8d44b/pick_echo".
2025-09-17 06:57:00 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:57:00 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000132s.
2025-09-17 06:57:02 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/cdac55591258580df0c9c8ad467811bb47a8d44b/provenance/mapflow/_provenance0".
2025-09-17 06:57:02 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:57:02 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.086999s.
2025-09-17 06:57:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/643bf87e92b840c31dac8d68a4372704ee112be6/pick_echo".
2025-09-17 06:57:03 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:57:03 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000108s.
2025-09-17 06:57:04 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/643bf87e92b840c31dac8d68a4372704ee112be6/provenance/mapflow/_provenance0".
2025-09-17 06:57:04 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:57:04 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.08692s.
2025-09-17 06:57:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.pick_echo" in "/tmp/mriqc_wf/funcMRIQC/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/pick_echo".
2025-09-17 06:57:05 | INFO | nipype.workflow | [Node] Executing "pick_echo" <mriqc.interfaces.functional.SelectEcho>
2025-09-17 06:57:05 | INFO | nipype.workflow | [Node] Finished "pick_echo", elapsed time 0.000125s.
2025-09-17 06:57:06 | INFO | nipype.workflow | [Node] Setting-up "_provenance0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/provenance/mapflow/_provenance0".
2025-09-17 06:57:06 | INFO | nipype.workflow | [Node] Executing "_provenance0" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 06:57:06 | INFO | nipype.workflow | [Node] Finished "_provenance0", elapsed time 0.089255s.
2025-09-17 06:57:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/pre_clip".
2025-09-17 06:57:07 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 06:57:16 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 9.687706s.
2025-09-17 06:57:18 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/RotationMask".
2025-09-17 06:57:18 | INFO | nipype.workflow | [Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
2025-09-17 06:57:19 | INFO | nipype.workflow | [Node] Finished "RotationMask", elapsed time 0.501815s.
2025-09-17 06:57:20 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicNoise" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/PlotMosaicNoise".
2025-09-17 06:57:20 | INFO | nipype.workflow | [Node] Executing "PlotMosaicNoise" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 06:57:25 | INFO | nipype.workflow | [Node] Finished "PlotMosaicNoise", elapsed time 5.041813s.
2025-09-17 06:57:26 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/cdac55591258580df0c9c8ad467811bb47a8d44b/non_steady_state_detector".
2025-09-17 06:57:26 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:57:27 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.228493s.
2025-09-17 06:57:28 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/643bf87e92b840c31dac8d68a4372704ee112be6/non_steady_state_detector".
2025-09-17 06:57:28 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:57:29 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.22638s.
2025-09-17 06:57:30 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/tmp/mriqc_wf/funcMRIQC/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/non_steady_state_detector".
2025-09-17 06:57:30 | INFO | nipype.workflow | [Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
2025-09-17 06:57:31 | INFO | nipype.workflow | [Node] Finished "non_steady_state_detector", elapsed time 0.221639s.
2025-09-17 06:57:32 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/pre_n4".
2025-09-17 06:57:32 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 06:58:36 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 62.85424s.
2025-09-17 06:58:36 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_background" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/ds_report_background".
2025-09-17 06:58:36 | INFO | nipype.workflow | [Node] Executing "ds_report_background" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 06:58:36 | INFO | nipype.workflow | [Node] Finished "ds_report_background", elapsed time 0.008553s.
2025-09-17 06:58:37 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/cdac55591258580df0c9c8ad467811bb47a8d44b/sanitize/mapflow/_sanitize0".
2025-09-17 06:58:37 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:58:37 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.047204s.
2025-09-17 06:58:38 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/643bf87e92b840c31dac8d68a4372704ee112be6/sanitize/mapflow/_sanitize0".
2025-09-17 06:58:38 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:58:38 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.046463s.
2025-09-17 06:58:40 | INFO | nipype.workflow | [Node] Setting-up "_sanitize0" in "/tmp/mriqc_wf/funcMRIQC/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/sanitize/mapflow/_sanitize0".
2025-09-17 06:58:40 | INFO | nipype.workflow | [Node] Executing "_sanitize0" <niworkflows.interfaces.header.SanitizeImage>
2025-09-17 06:58:40 | INFO | nipype.workflow | [Node] Finished "_sanitize0", elapsed time 0.047176s.
2025-09-17 06:58:42 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/synthstrip".
2025-09-17 06:58:42 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 06:59:48 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 65.333446s.
2025-09-17 06:59:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/cdac55591258580df0c9c8ad467811bb47a8d44b/estimate_hm".
2025-09-17 06:59:48 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:03:31 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 222.950661s.
2025-09-17 07:03:33 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cdac55591258580df0c9c8ad467811bb47a8d44b/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:03:33 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:03:34 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.629645s.
2025-09-17 07:03:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/643bf87e92b840c31dac8d68a4372704ee112be6/estimate_hm".
2025-09-17 07:03:35 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:07:17 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 222.602715s.
2025-09-17 07:07:19 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/643bf87e92b840c31dac8d68a4372704ee112be6/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:07:19 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:07:20 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.573108s.
2025-09-17 07:07:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.estimate_hm" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/estimate_hm".
2025-09-17 07:07:21 | INFO | nipype.workflow | [Node] Executing "estimate_hm" <nipype.interfaces.afni.preprocess.Volreg>
2025-09-17 07:11:03 | INFO | nipype.workflow | [Node] Finished "estimate_hm", elapsed time 222.250665s.
2025-09-17 07:11:05 | INFO | nipype.workflow | [Node] Setting-up "_SpikesMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/SpikesMask/mapflow/_SpikesMask0".
2025-09-17 07:11:05 | INFO | nipype.workflow | [Node] Executing "_SpikesMask0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:11:06 | INFO | nipype.workflow | [Node] Finished "_SpikesMask0", elapsed time 1.652066s.
2025-09-17 07:11:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/post_n4".
2025-09-17 07:11:07 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:11:21 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 14.655845s.
2025-09-17 07:11:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/smoothness".
2025-09-17 07:11:23 | INFO | nipype.workflow | [Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:11:25 | INFO | nipype.workflow | [Node] Finished "smoothness", elapsed time 2.783242s.
2025-09-17 07:11:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotMosaicZoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/PlotMosaicZoomed".
2025-09-17 07:11:27 | INFO | nipype.workflow | [Node] Executing "PlotMosaicZoomed" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:11:31 | INFO | nipype.workflow | [Node] Finished "PlotMosaicZoomed", elapsed time 3.803818s.
2025-09-17 07:11:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/PlotBrainmask".
2025-09-17 07:11:31 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:11:33 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 2.655398s.
2025-09-17 07:11:35 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/cdac55591258580df0c9c8ad467811bb47a8d44b/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:11:35 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:11:52 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 17.274049s.
2025-09-17 07:11:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/cdac55591258580df0c9c8ad467811bb47a8d44b/ComputeFD".
2025-09-17 07:11:53 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:11:53 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.006602s.
2025-09-17 07:11:55 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cdac55591258580df0c9c8ad467811bb47a8d44b/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:11:55 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:11:56 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.79265s.
2025-09-17 07:11:57 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/643bf87e92b840c31dac8d68a4372704ee112be6/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:11:57 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:12:14 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 17.465199s.
2025-09-17 07:12:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/643bf87e92b840c31dac8d68a4372704ee112be6/ComputeFD".
2025-09-17 07:12:15 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:12:15 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.006903s.
2025-09-17 07:12:17 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/643bf87e92b840c31dac8d68a4372704ee112be6/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:12:17 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:12:18 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.778687s.
2025-09-17 07:12:19 | INFO | nipype.workflow | [Node] Setting-up "_apply_hmc0" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/apply_hmc/mapflow/_apply_hmc0".
2025-09-17 07:12:19 | INFO | nipype.workflow | [Node] Executing "_apply_hmc0" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:12:36 | INFO | nipype.workflow | [Node] Finished "_apply_hmc0", elapsed time 17.196945s.
2025-09-17 07:12:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/tmp/mriqc_wf/funcMRIQC/fMRI_HMC/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/ComputeFD".
2025-09-17 07:12:37 | INFO | nipype.workflow | [Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
2025-09-17 07:12:37 | INFO | nipype.workflow | [Node] Finished "ComputeFD", elapsed time 0.003546s.
2025-09-17 07:12:39 | INFO | nipype.workflow | [Node] Setting-up "_SpikesFinderBgMask0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/SpikesFinderBgMask/mapflow/_SpikesFinderBgMask0".
2025-09-17 07:12:39 | INFO | nipype.workflow | [Node] Executing "_SpikesFinderBgMask0" <mriqc.interfaces.functional.Spikes>
2025-09-17 07:12:40 | INFO | nipype.workflow | [Node] Finished "_SpikesFinderBgMask0", elapsed time 0.808828s.
2025-09-17 07:12:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/anatMRIQC/synthstrip_wf/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/final_masked".
2025-09-17 07:12:41 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:12:41 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.234195s.
2025-09-17 07:12:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization".
2025-09-17 07:12:43 | INFO | nipype.workflow | [Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:12:43 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:13:45 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/t1w-mni_registration_testing_000.json.
2025-09-17 07:13:45 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ ants_t1_to_mni, ants_t1_to_mni_Warped.nii.gz ] --transform Rigid[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.2 ] --convergence [ 20, 1e-07, 15 ] --smoothing-sigmas 4.0vox --shrink-factors 2 --use-histogram-matching 0 --transform Affine[ 1.0 ] --metric Mattes[ /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/fixed_masked.nii.gz, /tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/moving_masked.nii.gz, 1, 56, Random, 0.1 ] --convergence [ 15, 1e-08, 5 ] --smoothing-sigmas 2.0vox --shrink-factors 1 --use-histogram-matching 1 --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:14:00 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:14:01 | INFO | niworkflows | Report - setting fixed (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/fixed_masked.nii.gz) and moving (/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/SpatialNormalization/ants_t1_to_mni_Warped.nii.gz) images
2025-09-17 07:14:01 | INFO | niworkflows | Generating visual report
2025-09-17 07:14:18 | INFO | nipype.workflow | [Node] Finished "SpatialNormalization", elapsed time 95.322372s.
2025-09-17 07:14:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_zoomed" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/ds_report_zoomed".
2025-09-17 07:14:19 | INFO | nipype.workflow | [Node] Executing "ds_report_zoomed" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:14:19 | INFO | nipype.workflow | [Node] Finished "ds_report_zoomed", elapsed time 0.004689s.
2025-09-17 07:14:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/ds_report_bmask".
2025-09-17 07:14:19 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:14:19 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.005332s.
2025-09-17 07:14:19 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/cdac55591258580df0c9c8ad467811bb47a8d44b/mean/mapflow/_mean0".
2025-09-17 07:14:19 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:14:20 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 1.029666s.
2025-09-17 07:14:21 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/cdac55591258580df0c9c8ad467811bb47a8d44b/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:14:21 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:14:22 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.81052s.
2025-09-17 07:14:23 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/cdac55591258580df0c9c8ad467811bb47a8d44b/quality/mapflow/_quality0".
2025-09-17 07:14:23 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:14:25 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 2.397875s.
2025-09-17 07:14:27 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/643bf87e92b840c31dac8d68a4372704ee112be6/mean/mapflow/_mean0".
2025-09-17 07:14:27 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:14:28 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.967096s.
2025-09-17 07:14:29 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/643bf87e92b840c31dac8d68a4372704ee112be6/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:14:29 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:14:30 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.738509s.
2025-09-17 07:14:31 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/643bf87e92b840c31dac8d68a4372704ee112be6/quality/mapflow/_quality0".
2025-09-17 07:14:31 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:14:33 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 2.359774s.
2025-09-17 07:14:35 | INFO | nipype.workflow | [Node] Setting-up "_mean0" in "/tmp/mriqc_wf/funcMRIQC/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/mean/mapflow/_mean0".
2025-09-17 07:14:35 | INFO | nipype.workflow | [Node] Executing "_mean0" <nipype.interfaces.afni.utils.TStat>
2025-09-17 07:14:36 | INFO | nipype.workflow | [Node] Finished "_mean0", elapsed time 0.992473s.
2025-09-17 07:14:37 | INFO | nipype.workflow | [Node] Setting-up "_compute_tsnr0" in "/tmp/mriqc_wf/funcMRIQC/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/compute_tsnr/mapflow/_compute_tsnr0".
2025-09-17 07:14:37 | INFO | nipype.workflow | [Node] Executing "_compute_tsnr0" <nipype.algorithms.confounds.TSNR>
2025-09-17 07:14:38 | INFO | nipype.workflow | [Node] Finished "_compute_tsnr0", elapsed time 0.786543s.
2025-09-17 07:14:39 | INFO | nipype.workflow | [Node] Setting-up "_quality0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/quality/mapflow/_quality0".
2025-09-17 07:14:39 | INFO | nipype.workflow | [Node] Executing "_quality0" <nipype.interfaces.afni.preprocess.QualityIndex>
2025-09-17 07:14:41 | INFO | nipype.workflow | [Node] Finished "_quality0", elapsed time 2.30452s.
2025-09-17 07:14:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_norm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/ds_report_norm".
2025-09-17 07:14:43 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:14:43 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.005239s.
2025-09-17 07:14:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/cdac55591258580df0c9c8ad467811bb47a8d44b/pre_clip".
2025-09-17 07:14:43 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:14:43 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.270503s.
2025-09-17 07:14:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/cdac55591258580df0c9c8ad467811bb47a8d44b/SharpenEPI".
2025-09-17 07:14:45 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:14:47 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.754489s.
2025-09-17 07:14:47 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cdac55591258580df0c9c8ad467811bb47a8d44b/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:14:47 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:14:48 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 1.008432s.
2025-09-17 07:14:49 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cdac55591258580df0c9c8ad467811bb47a8d44b/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:14:49 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:14:50 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 1.151764s.
2025-09-17 07:14:51 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cdac55591258580df0c9c8ad467811bb47a8d44b/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:14:51 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:14:52 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 1.162402s.
2025-09-17 07:14:53 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/643bf87e92b840c31dac8d68a4372704ee112be6/pre_clip".
2025-09-17 07:14:53 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:14:53 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.27521s.
2025-09-17 07:14:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/643bf87e92b840c31dac8d68a4372704ee112be6/SharpenEPI".
2025-09-17 07:14:55 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:14:57 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.847308s.
2025-09-17 07:14:57 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/643bf87e92b840c31dac8d68a4372704ee112be6/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:14:57 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:14:58 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 1.023152s.
2025-09-17 07:14:59 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/643bf87e92b840c31dac8d68a4372704ee112be6/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:14:59 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:15:00 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 1.120851s.
2025-09-17 07:15:01 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/643bf87e92b840c31dac8d68a4372704ee112be6/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:15:01 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:15:02 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 1.134895s.
2025-09-17 07:15:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_clip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/pre_clip".
2025-09-17 07:15:03 | INFO | nipype.workflow | [Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
2025-09-17 07:15:03 | INFO | nipype.workflow | [Node] Finished "pre_clip", elapsed time 0.27899s.
2025-09-17 07:15:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/SharpenEPI".
2025-09-17 07:15:05 | INFO | nipype.workflow | [Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:15:07 | INFO | nipype.workflow | [Node] Finished "SharpenEPI", elapsed time 1.827149s.
2025-09-17 07:15:07 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicMean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/PlotMosaicMean/mapflow/_PlotMosaicMean0".
2025-09-17 07:15:07 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicMean0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:15:08 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicMean0", elapsed time 0.992305s.
2025-09-17 07:15:09 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicNoise0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/PlotMosaicNoise/mapflow/_PlotMosaicNoise0".
2025-09-17 07:15:09 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicNoise0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:15:10 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicNoise0", elapsed time 1.032673s.
2025-09-17 07:15:11 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicSD0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/PlotMosaicSD/mapflow/_PlotMosaicSD0".
2025-09-17 07:15:11 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicSD0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:15:12 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicSD0", elapsed time 1.080496s.
2025-09-17 07:15:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/cdac55591258580df0c9c8ad467811bb47a8d44b/pre_n4".
2025-09-17 07:15:13 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:15:15 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.917294s.
2025-09-17 07:15:17 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cdac55591258580df0c9c8ad467811bb47a8d44b/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:15:17 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:15:17 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.004986s.
2025-09-17 07:15:17 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cdac55591258580df0c9c8ad467811bb47a8d44b/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:15:17 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:15:17 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.004728s.
2025-09-17 07:15:17 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cdac55591258580df0c9c8ad467811bb47a8d44b/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:15:17 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:15:17 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.005141s.
2025-09-17 07:15:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/643bf87e92b840c31dac8d68a4372704ee112be6/pre_n4".
2025-09-17 07:15:17 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:15:19 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.752017s.
2025-09-17 07:15:21 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/643bf87e92b840c31dac8d68a4372704ee112be6/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:15:21 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:15:21 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.005367s.
2025-09-17 07:15:21 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/643bf87e92b840c31dac8d68a4372704ee112be6/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:15:21 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:15:21 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.00539s.
2025-09-17 07:15:21 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/643bf87e92b840c31dac8d68a4372704ee112be6/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:15:21 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:15:21 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.004993s.
2025-09-17 07:15:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.pre_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/pre_n4".
2025-09-17 07:15:21 | INFO | nipype.workflow | [Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:15:23 | INFO | nipype.workflow | [Node] Finished "pre_n4", elapsed time 1.7360280000000001s.
2025-09-17 07:15:25 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_mean0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/ds_report_mean/mapflow/_ds_report_mean0".
2025-09-17 07:15:25 | INFO | nipype.workflow | [Node] Executing "_ds_report_mean0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:15:25 | INFO | nipype.workflow | [Node] Finished "_ds_report_mean0", elapsed time 0.00506s.
2025-09-17 07:15:25 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_background0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/ds_report_background/mapflow/_ds_report_background0".
2025-09-17 07:15:25 | INFO | nipype.workflow | [Node] Executing "_ds_report_background0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:15:25 | INFO | nipype.workflow | [Node] Finished "_ds_report_background0", elapsed time 0.012073s.
2025-09-17 07:15:25 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_stdev0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/ds_report_stdev/mapflow/_ds_report_stdev0".
2025-09-17 07:15:25 | INFO | nipype.workflow | [Node] Executing "_ds_report_stdev0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:15:25 | INFO | nipype.workflow | [Node] Finished "_ds_report_stdev0", elapsed time 0.00484s.
2025-09-17 07:15:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/cdac55591258580df0c9c8ad467811bb47a8d44b/synthstrip".
2025-09-17 07:15:25 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:16:18 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 52.77409s.
2025-09-17 07:16:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/643bf87e92b840c31dac8d68a4372704ee112be6/synthstrip".
2025-09-17 07:16:19 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:17:11 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 52.51422s.
2025-09-17 07:17:13 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.synthstrip" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/synthstrip".
2025-09-17 07:17:13 | INFO | nipype.workflow | [Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
2025-09-17 07:18:05 | INFO | nipype.workflow | [Node] Finished "synthstrip", elapsed time 52.268816s.
2025-09-17 07:18:07 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/cdac55591258580df0c9c8ad467811bb47a8d44b/post_n4".
2025-09-17 07:18:07 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:18:08 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.838596s.
2025-09-17 07:18:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/cdac55591258580df0c9c8ad467811bb47a8d44b/EPI2MNI".
2025-09-17 07:18:09 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:18:09 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:18:34 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:18:34 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/cdac55591258580df0c9c8ad467811bb47a8d44b/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/cdac55591258580df0c9c8ad467811bb47a8d44b/SharpenEPI/sub-06_task-balloonanalogrisktask_run-01_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/cdac55591258580df0c9c8ad467811bb47a8d44b/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/cdac55591258580df0c9c8ad467811bb47a8d44b/SharpenEPI/sub-06_task-balloonanalogrisktask_run-01_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/cdac55591258580df0c9c8ad467811bb47a8d44b/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/cdac55591258580df0c9c8ad467811bb47a8d44b/SharpenEPI/sub-06_task-balloonanalogrisktask_run-01_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/cdac55591258580df0c9c8ad467811bb47a8d44b/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:19:46 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:19:46 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/cdac55591258580df0c9c8ad467811bb47a8d44b/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:19:46 | INFO | niworkflows | Generating visual report
2025-09-17 07:20:05 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 116.360815s.
2025-09-17 07:20:07 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/cdac55591258580df0c9c8ad467811bb47a8d44b/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:20:07 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:20:14 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 6.809607s.
2025-09-17 07:20:15 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/cdac55591258580df0c9c8ad467811bb47a8d44b/smoothness/mapflow/_smoothness0".
2025-09-17 07:20:15 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:20:15 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.401691s.
2025-09-17 07:20:17 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/cdac55591258580df0c9c8ad467811bb47a8d44b/outliers/mapflow/_outliers0".
2025-09-17 07:20:17 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:20:18 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 1.452926s.
2025-09-17 07:20:19 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/cdac55591258580df0c9c8ad467811bb47a8d44b/gcor/mapflow/_gcor0".
2025-09-17 07:20:19 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:20:21 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 2.157905s.
2025-09-17 07:20:23 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cdac55591258580df0c9c8ad467811bb47a8d44b/dilated_mask".
2025-09-17 07:20:23 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:20:23 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.015683s.
2025-09-17 07:20:25 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cdac55591258580df0c9c8ad467811bb47a8d44b/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:20:25 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:20:26 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 1.105502s.
2025-09-17 07:20:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cdac55591258580df0c9c8ad467811bb47a8d44b/PlotBrainmask".
2025-09-17 07:20:27 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:20:29 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.454985s.
2025-09-17 07:20:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/643bf87e92b840c31dac8d68a4372704ee112be6/post_n4".
2025-09-17 07:20:29 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:20:30 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.947283s.
2025-09-17 07:20:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/643bf87e92b840c31dac8d68a4372704ee112be6/EPI2MNI".
2025-09-17 07:20:31 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:20:31 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:20:59 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:20:59 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/643bf87e92b840c31dac8d68a4372704ee112be6/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/643bf87e92b840c31dac8d68a4372704ee112be6/SharpenEPI/sub-06_task-balloonanalogrisktask_run-02_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/643bf87e92b840c31dac8d68a4372704ee112be6/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/643bf87e92b840c31dac8d68a4372704ee112be6/SharpenEPI/sub-06_task-balloonanalogrisktask_run-02_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/643bf87e92b840c31dac8d68a4372704ee112be6/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/643bf87e92b840c31dac8d68a4372704ee112be6/SharpenEPI/sub-06_task-balloonanalogrisktask_run-02_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/643bf87e92b840c31dac8d68a4372704ee112be6/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:22:18 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:22:18 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/643bf87e92b840c31dac8d68a4372704ee112be6/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:22:18 | INFO | niworkflows | Generating visual report
2025-09-17 07:22:37 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 126.048525s.
2025-09-17 07:22:39 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/643bf87e92b840c31dac8d68a4372704ee112be6/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:22:39 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:22:46 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 6.710329s.
2025-09-17 07:22:47 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/643bf87e92b840c31dac8d68a4372704ee112be6/smoothness/mapflow/_smoothness0".
2025-09-17 07:22:47 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:22:47 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.341253s.
2025-09-17 07:22:49 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/643bf87e92b840c31dac8d68a4372704ee112be6/outliers/mapflow/_outliers0".
2025-09-17 07:22:49 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:22:50 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 1.30664s.
2025-09-17 07:22:51 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/643bf87e92b840c31dac8d68a4372704ee112be6/gcor/mapflow/_gcor0".
2025-09-17 07:22:51 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:22:53 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.942633s.
2025-09-17 07:22:55 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/643bf87e92b840c31dac8d68a4372704ee112be6/dilated_mask".
2025-09-17 07:22:55 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:22:55 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.016073s.
2025-09-17 07:22:57 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/643bf87e92b840c31dac8d68a4372704ee112be6/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:22:57 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:22:58 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 1.04753s.
2025-09-17 07:22:59 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/643bf87e92b840c31dac8d68a4372704ee112be6/PlotBrainmask".
2025-09-17 07:22:59 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:23:01 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.49535s.
2025-09-17 07:23:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.post_n4" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/post_n4".
2025-09-17 07:23:01 | INFO | nipype.workflow | [Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
2025-09-17 07:23:02 | INFO | nipype.workflow | [Node] Finished "post_n4", elapsed time 0.873742s.
2025-09-17 07:23:03 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/EPI2MNI".
2025-09-17 07:23:03 | INFO | nipype.workflow | [Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
2025-09-17 07:23:03 | INFO | niworkflows | Estimating initial transform using AffineInitializer
2025-09-17 07:23:31 | INFO | niworkflows | Terminal outputs of initialization saved (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/EPI2MNI/stderr.nipype-init).
2025-09-17 07:23:31 | INFO | niworkflows | Loading settings from file /opt/conda/lib/python3.11/site-packages/niworkflows/data/boldref-mni_registration_precise_000.json.
2025-09-17 07:23:31 | INFO | niworkflows | Retry #1, commandline:
antsRegistration --collapse-output-transforms 1 --dimensionality 3 --float 0 --initial-moving-transform [ /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/EPI2MNI/transform.mat, 0 ] --initialize-transforms-per-stage 0 --interpolation LanczosWindowedSinc --output [ epi_to_mni, epi_to_mni_Warped.nii.gz ] --transform Rigid[ 0.05 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/SharpenEPI/sub-06_task-balloonanalogrisktask_run-03_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 10000x1000x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 4x2x1 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform Affine[ 0.08 ] --metric Mattes[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/SharpenEPI/sub-06_task-balloonanalogrisktask_run-03_desc-realigned_bold_tstat_corrected.nii.gz, 1, 56, Regular, 0.25 ] --convergence [ 500x250x100, 1e-06, 20 ] --smoothing-sigmas 4.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --transform SyN[ 0.1, 3.0, 0.0 ] --metric CC[ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz, /tmp/mriqc_wf/funcMRIQC/SpatialNormalization/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/SharpenEPI/sub-06_task-balloonanalogrisktask_run-03_desc-realigned_bold_tstat_corrected.nii.gz, 1, 4, None, 1 ] --convergence [ 100x30x20, 1e-06, 10 ] --smoothing-sigmas 3.0x2.0x1.0vox --shrink-factors 8x4x2 --use-histogram-matching 1 --masks [ /templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-brain_mask.nii.gz, /tmp/mriqc_wf/funcMRIQC/synthstrip_wf/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/synthstrip/clipped_corrected_desc-brain_mask.nii.gz ] --winsorize-image-intensities [ 0.005, 0.995 ] --write-composite-transform 1
2025-09-17 07:24:39 | INFO | niworkflows | Successful spatial normalization (retry #1).
2025-09-17 07:24:39 | INFO | niworkflows | Report - setting fixed (/templateflow/tpl-MNI152NLin2009cAsym/tpl-MNI152NLin2009cAsym_res-02_desc-fMRIPrep_boldref.nii.gz) and moving (/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/EPI2MNI/epi_to_mni_Warped.nii.gz) images
2025-09-17 07:24:39 | INFO | niworkflows | Generating visual report
2025-09-17 07:24:56 | INFO | nipype.workflow | [Node] Finished "EPI2MNI", elapsed time 112.991956s.
2025-09-17 07:24:57 | INFO | nipype.workflow | [Node] Setting-up "_ComputeDVARS0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/ComputeDVARS/mapflow/_ComputeDVARS0".
2025-09-17 07:24:57 | INFO | nipype.workflow | [Node] Executing "_ComputeDVARS0" <nipype.algorithms.confounds.ComputeDVARS>
2025-09-17 07:25:03 | INFO | nipype.workflow | [Node] Finished "_ComputeDVARS0", elapsed time 6.23755s.
2025-09-17 07:25:05 | INFO | nipype.workflow | [Node] Setting-up "_smoothness0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/smoothness/mapflow/_smoothness0".
2025-09-17 07:25:05 | INFO | nipype.workflow | [Node] Executing "_smoothness0" <nipype.interfaces.afni.utils.FWHMx>
2025-09-17 07:25:05 | INFO | nipype.workflow | [Node] Finished "_smoothness0", elapsed time 0.281129s.
2025-09-17 07:25:07 | INFO | nipype.workflow | [Node] Setting-up "_outliers0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/outliers/mapflow/_outliers0".
2025-09-17 07:25:07 | INFO | nipype.workflow | [Node] Executing "_outliers0" <nipype.interfaces.afni.preprocess.OutlierCount>
2025-09-17 07:25:08 | INFO | nipype.workflow | [Node] Finished "_outliers0", elapsed time 1.203545s.
2025-09-17 07:25:09 | INFO | nipype.workflow | [Node] Setting-up "_gcor0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/gcor/mapflow/_gcor0".
2025-09-17 07:25:09 | INFO | nipype.workflow | [Node] Executing "_gcor0" <mriqc.interfaces.transitional.GCOR>
2025-09-17 07:25:11 | INFO | nipype.workflow | [Node] Finished "_gcor0", elapsed time 1.812975s.
2025-09-17 07:25:11 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.dilated_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/dilated_mask".
2025-09-17 07:25:11 | INFO | nipype.workflow | [Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
2025-09-17 07:25:11 | INFO | nipype.workflow | [Node] Finished "dilated_mask", elapsed time 0.015907s.
2025-09-17 07:25:13 | INFO | nipype.workflow | [Node] Setting-up "_PlotMosaicZoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/PlotMosaicZoomed/mapflow/_PlotMosaicZoomed0".
2025-09-17 07:25:13 | INFO | nipype.workflow | [Node] Executing "_PlotMosaicZoomed0" <nireports.interfaces.mosaic.PlotMosaic>
2025-09-17 07:25:14 | INFO | nipype.workflow | [Node] Finished "_PlotMosaicZoomed0", elapsed time 0.992478s.
2025-09-17 07:25:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.PlotBrainmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/PlotBrainmask".
2025-09-17 07:25:15 | INFO | nipype.workflow | [Node] Executing "PlotBrainmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:25:16 | INFO | nipype.workflow | [Node] Finished "PlotBrainmask", elapsed time 1.286012s.
2025-09-17 07:25:17 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/cdac55591258580df0c9c8ad467811bb47a8d44b/final_masked".
2025-09-17 07:25:17 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:25:17 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.021944s.
2025-09-17 07:25:19 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/cdac55591258580df0c9c8ad467811bb47a8d44b/ResampleSegmentation".
2025-09-17 07:25:19 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:25:20 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.182906s.
2025-09-17 07:25:21 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cdac55591258580df0c9c8ad467811bb47a8d44b/ds_report_norm".
2025-09-17 07:25:21 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:25:21 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004921s.
2025-09-17 07:25:21 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/cdac55591258580df0c9c8ad467811bb47a8d44b/measures/mapflow/_measures0".
2025-09-17 07:25:21 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:25:22 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.673843s.
2025-09-17 07:25:23 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/cdac55591258580df0c9c8ad467811bb47a8d44b/timeseries/mapflow/_timeseries0".
2025-09-17 07:25:23 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:25:23 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.022885s.
2025-09-17 07:25:25 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cdac55591258580df0c9c8ad467811bb47a8d44b/subtract_mask".
2025-09-17 07:25:25 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:25:25 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.015927s.
2025-09-17 07:25:27 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cdac55591258580df0c9c8ad467811bb47a8d44b/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:25:27 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:25:27 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.005309s.
2025-09-17 07:25:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cdac55591258580df0c9c8ad467811bb47a8d44b/ds_report_bmask".
2025-09-17 07:25:27 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:25:27 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004896s.
2025-09-17 07:25:27 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/643bf87e92b840c31dac8d68a4372704ee112be6/final_masked".
2025-09-17 07:25:27 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:25:27 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.036283s.
2025-09-17 07:25:29 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/643bf87e92b840c31dac8d68a4372704ee112be6/ResampleSegmentation".
2025-09-17 07:25:29 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:25:30 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.142357s.
2025-09-17 07:25:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/643bf87e92b840c31dac8d68a4372704ee112be6/ds_report_norm".
2025-09-17 07:25:31 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:25:31 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.004898s.
2025-09-17 07:25:31 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/643bf87e92b840c31dac8d68a4372704ee112be6/measures/mapflow/_measures0".
2025-09-17 07:25:31 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:25:32 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.662486s.
2025-09-17 07:25:33 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/643bf87e92b840c31dac8d68a4372704ee112be6/timeseries/mapflow/_timeseries0".
2025-09-17 07:25:33 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:25:33 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.016813s.
2025-09-17 07:25:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/643bf87e92b840c31dac8d68a4372704ee112be6/subtract_mask".
2025-09-17 07:25:35 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:25:35 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.018083s.
2025-09-17 07:25:37 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/643bf87e92b840c31dac8d68a4372704ee112be6/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:25:37 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:25:37 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004823s.
2025-09-17 07:25:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/643bf87e92b840c31dac8d68a4372704ee112be6/ds_report_bmask".
2025-09-17 07:25:37 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:25:37 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004652s.
2025-09-17 07:25:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.synthstrip_wf.final_masked" in "/tmp/mriqc_wf/funcMRIQC/synthstrip_wf/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/final_masked".
2025-09-17 07:25:37 | INFO | nipype.workflow | [Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:25:37 | INFO | nipype.workflow | [Node] Finished "final_masked", elapsed time 0.02189s.
2025-09-17 07:25:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/tmp/mriqc_wf/funcMRIQC/SpatialNormalization/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/ResampleSegmentation".
2025-09-17 07:25:39 | INFO | nipype.workflow | [Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
2025-09-17 07:25:40 | INFO | nipype.workflow | [Node] Finished "ResampleSegmentation", elapsed time 1.123068s.
2025-09-17 07:25:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_norm" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/ds_report_norm".
2025-09-17 07:25:41 | INFO | nipype.workflow | [Node] Executing "ds_report_norm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:25:41 | INFO | nipype.workflow | [Node] Finished "ds_report_norm", elapsed time 0.005223s.
2025-09-17 07:25:41 | INFO | nipype.workflow | [Node] Setting-up "_measures0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/measures/mapflow/_measures0".
2025-09-17 07:25:41 | INFO | nipype.workflow | [Node] Executing "_measures0" <mriqc.interfaces.functional.FunctionalQC>
2025-09-17 07:25:42 | INFO | nipype.workflow | [Node] Finished "_measures0", elapsed time 0.687863s.
2025-09-17 07:25:43 | INFO | nipype.workflow | [Node] Setting-up "_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/timeseries/mapflow/_timeseries0".
2025-09-17 07:25:43 | INFO | nipype.workflow | [Node] Executing "_timeseries0" <mriqc.interfaces.functional.GatherTimeseries>
2025-09-17 07:25:43 | INFO | nipype.workflow | [Node] Finished "_timeseries0", elapsed time 0.016086s.
2025-09-17 07:25:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.subtract_mask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/subtract_mask".
2025-09-17 07:25:45 | INFO | nipype.workflow | [Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
2025-09-17 07:25:45 | INFO | nipype.workflow | [Node] Finished "subtract_mask", elapsed time 0.016871s.
2025-09-17 07:25:47 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_zoomed0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/ds_report_zoomed/mapflow/_ds_report_zoomed0".
2025-09-17 07:25:47 | INFO | nipype.workflow | [Node] Executing "_ds_report_zoomed0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:25:47 | INFO | nipype.workflow | [Node] Finished "_ds_report_zoomed0", elapsed time 0.004869s.
2025-09-17 07:25:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.ds_report_bmask" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/ds_report_bmask".
2025-09-17 07:25:47 | INFO | nipype.workflow | [Node] Executing "ds_report_bmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:25:47 | INFO | nipype.workflow | [Node] Finished "ds_report_bmask", elapsed time 0.004813s.
2025-09-17 07:25:47 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/cdac55591258580df0c9c8ad467811bb47a8d44b/datasink/mapflow/_datasink0".
2025-09-17 07:25:47 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:25:47 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000488s.
2025-09-17 07:25:48 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/cdac55591258580df0c9c8ad467811bb47a8d44b/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:25:48 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:25:48 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004136s.
2025-09-17 07:25:48 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cdac55591258580df0c9c8ad467811bb47a8d44b/parcels".
2025-09-17 07:25:48 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:25:48 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.01706s.
2025-09-17 07:25:49 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/643bf87e92b840c31dac8d68a4372704ee112be6/datasink/mapflow/_datasink0".
2025-09-17 07:25:49 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:25:49 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000388s.
2025-09-17 07:25:49 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/643bf87e92b840c31dac8d68a4372704ee112be6/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:25:49 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:25:49 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.00409s.
2025-09-17 07:25:49 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/643bf87e92b840c31dac8d68a4372704ee112be6/parcels".
2025-09-17 07:25:49 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:25:49 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.016965s.
2025-09-17 07:25:51 | INFO | nipype.workflow | [Node] Setting-up "_datasink0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/datasink/mapflow/_datasink0".
2025-09-17 07:25:51 | INFO | nipype.workflow | [Node] Executing "_datasink0" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:25:51 | INFO | nipype.workflow | [Node] Finished "_datasink0", elapsed time 0.000376s.
2025-09-17 07:25:51 | INFO | nipype.workflow | [Node] Setting-up "_ds_timeseries0" in "/tmp/mriqc_wf/funcMRIQC/ComputeIQMs/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/ds_timeseries/mapflow/_ds_timeseries0".
2025-09-17 07:25:51 | INFO | nipype.workflow | [Node] Executing "_ds_timeseries0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:25:51 | INFO | nipype.workflow | [Node] Finished "_ds_timeseries0", elapsed time 0.004178s.
2025-09-17 07:25:51 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.funcMRIQC.func_report_wf.parcels" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/parcels".
2025-09-17 07:25:51 | INFO | nipype.workflow | [Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:25:51 | INFO | nipype.workflow | [Node] Finished "parcels", elapsed time 0.014836s.
2025-09-17 07:25:53 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cdac55591258580df0c9c8ad467811bb47a8d44b/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:25:53 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:25:58 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 4.401525s.
2025-09-17 07:25:59 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/643bf87e92b840c31dac8d68a4372704ee112be6/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:25:59 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:26:03 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 4.289538s.
2025-09-17 07:26:05 | INFO | nipype.workflow | [Node] Setting-up "_BigPlot0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/BigPlot/mapflow/_BigPlot0".
2025-09-17 07:26:05 | INFO | nipype.workflow | [Node] Executing "_BigPlot0" <nireports.interfaces.fmri.FMRISummary>
2025-09-17 07:26:10 | INFO | nipype.workflow | [Node] Finished "_BigPlot0", elapsed time 4.55756s.
2025-09-17 07:26:11 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/cdac55591258580df0c9c8ad467811bb47a8d44b/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:26:11 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:26:11 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004918s.
2025-09-17 07:26:11 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/643bf87e92b840c31dac8d68a4372704ee112be6/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:26:11 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:26:11 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.005119s.
2025-09-17 07:26:11 | INFO | nipype.workflow | [Node] Setting-up "_ds_report_carpet0" in "/tmp/mriqc_wf/funcMRIQC/func_report_wf/07dd9e89460e156cf0b2a013fd61a6c272b4b44c/ds_report_carpet/mapflow/_ds_report_carpet0".
2025-09-17 07:26:11 | INFO | nipype.workflow | [Node] Executing "_ds_report_carpet0" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:26:11 | INFO | nipype.workflow | [Node] Finished "_ds_report_carpet0", elapsed time 0.004593s.
2025-09-17 07:26:12 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-09-17 07:26:12 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w0" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-09-17 07:26:17 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w0", elapsed time 4.94467s.
2025-09-17 07:26:17 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-09-17 07:26:17 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w1" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-09-17 07:26:22 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w1", elapsed time 4.980053s.
2025-09-17 07:26:23 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-09-17 07:26:23 | INFO | nipype.workflow | [Node] Executing "_tpms_std2t1w2" <niworkflows.interfaces.fixes.FixHeaderApplyTransforms>
2025-09-17 07:26:28 | INFO | nipype.workflow | [Node] Finished "_tpms_std2t1w2", elapsed time 4.8957180000000005s.
2025-09-17 07:26:29 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w0" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w0".
2025-09-17 07:26:29 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w0" - collecting precomputed outputs
2025-09-17 07:26:29 | INFO | nipype.workflow | [Node] "_tpms_std2t1w0" found cached.
2025-09-17 07:26:29 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w1" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w1".
2025-09-17 07:26:29 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w1" - collecting precomputed outputs
2025-09-17 07:26:29 | INFO | nipype.workflow | [Node] "_tpms_std2t1w1" found cached.
2025-09-17 07:26:29 | INFO | nipype.workflow | [Node] Setting-up "_tpms_std2t1w2" in "/tmp/mriqc_wf/anatMRIQC/SpatialNormalization/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/tpms_std2t1w/mapflow/_tpms_std2t1w2".
2025-09-17 07:26:29 | INFO | nipype.workflow | [Node] Cached "_tpms_std2t1w2" - collecting precomputed outputs
2025-09-17 07:26:29 | INFO | nipype.workflow | [Node] "_tpms_std2t1w2" found cached.
2025-09-17 07:26:31 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Enhance" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/Enhance".
2025-09-17 07:26:31 | INFO | nipype.workflow | [Node] Executing "Enhance" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:26:32 | INFO | nipype.workflow | [Node] Finished "Enhance", elapsed time 0.551427s.
2025-09-17 07:26:33 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.format_tpm_names" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/format_tpm_names".
2025-09-17 07:26:33 | INFO | nipype.workflow | [Node] Executing "format_tpm_names" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:26:34 | INFO | nipype.workflow | [Node] Finished "format_tpm_names", elapsed time 0.998684s.
2025-09-17 07:26:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.Grad" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/Grad".
2025-09-17 07:26:35 | INFO | nipype.workflow | [Node] Executing "Grad" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:26:37 | INFO | nipype.workflow | [Node] Finished "Grad", elapsed time 1.529595s.
2025-09-17 07:26:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.apply_mask" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/apply_mask".
2025-09-17 07:26:37 | INFO | nipype.workflow | [Node] Executing "apply_mask" <niworkflows.interfaces.nibabel.ApplyMask>
2025-09-17 07:26:37 | INFO | nipype.workflow | [Node] Finished "apply_mask", elapsed time 0.254035s.
2025-09-17 07:26:39 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.GradientThreshold" in "/tmp/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/GradientThreshold".
2025-09-17 07:26:39 | INFO | nipype.workflow | [Node] Executing "GradientThreshold" <nipype.interfaces.utility.wrappers.Function>
2025-09-17 07:26:44 | INFO | nipype.workflow | [Node] Finished "GradientThreshold", elapsed time 5.162835s.
2025-09-17 07:26:45 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.brain_tissue_segmentation.segmentation" in "/tmp/mriqc_wf/anatMRIQC/brain_tissue_segmentation/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/segmentation".
2025-09-17 07:26:45 | INFO | nipype.workflow | [Node] Executing "segmentation" <nipype.interfaces.ants.segmentation.Atropos>
2025-09-17 07:27:33 | INFO | nipype.workflow | [Node] Finished "segmentation", elapsed time 48.241824s.
2025-09-17 07:27:35 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/tmp/mriqc_wf/anatMRIQC/AirMaskWorkflow/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/ArtifactMask".
2025-09-17 07:27:35 | INFO | nipype.workflow | [Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
2025-09-17 07:27:37 | INFO | nipype.workflow | [Node] Finished "ArtifactMask", elapsed time 1.501177s.
2025-09-17 07:27:37 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotHeadmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/PlotHeadmask".
2025-09-17 07:27:37 | INFO | nipype.workflow | [Node] Executing "PlotHeadmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:27:39 | INFO | nipype.workflow | [Node] Finished "PlotHeadmask", elapsed time 2.235749s.
2025-09-17 07:27:41 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/harmonize".
2025-09-17 07:27:41 | INFO | nipype.workflow | [Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
2025-09-17 07:27:42 | INFO | nipype.workflow | [Node] Finished "harmonize", elapsed time 0.711405s.
2025-09-17 07:27:43 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotSegmentation" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/PlotSegmentation".
2025-09-17 07:27:43 | INFO | nipype.workflow | [Node] Executing "PlotSegmentation" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:27:46 | INFO | nipype.workflow | [Node] Finished "PlotSegmentation", elapsed time 2.472509s.
2025-09-17 07:27:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/provenance".
2025-09-17 07:27:47 | INFO | nipype.workflow | [Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
2025-09-17 07:27:47 | INFO | nipype.workflow | [Node] Finished "provenance", elapsed time 0.045943s.
2025-09-17 07:27:47 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/ComputeQI2".
2025-09-17 07:27:47 | INFO | nipype.workflow | [Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
2025-09-17 07:28:01 | INFO | nipype.workflow | [Node] Finished "ComputeQI2", elapsed time 13.212499s.
2025-09-17 07:28:01 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotAirmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/PlotAirmask".
2025-09-17 07:28:01 | INFO | nipype.workflow | [Node] Executing "PlotAirmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:28:03 | INFO | nipype.workflow | [Node] Finished "PlotAirmask", elapsed time 2.161534s.
2025-09-17 07:28:05 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.PlotArtmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/PlotArtmask".
2025-09-17 07:28:05 | INFO | nipype.workflow | [Node] Executing "PlotArtmask" <nireports.interfaces.mosaic.PlotContours>
2025-09-17 07:28:07 | INFO | nipype.workflow | [Node] Finished "PlotArtmask", elapsed time 2.173977s.
2025-09-17 07:28:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_headmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/ds_report_headmask".
2025-09-17 07:28:09 | INFO | nipype.workflow | [Node] Executing "ds_report_headmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:28:09 | INFO | nipype.workflow | [Node] Finished "ds_report_headmask", elapsed time 0.014295s.
2025-09-17 07:28:09 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/measures".
2025-09-17 07:28:09 | INFO | nipype.workflow | [Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
2025-09-17 07:28:11 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=19.8812)
2025-09-17 07:28:11 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=19.8812)
2025-09-17 07:28:11 | WARNING | nipype.interface | Estimated signal variation in the background was too small (MAD=0.0, sigma=19.8812)
2025-09-17 07:28:14 | INFO | nipype.workflow | [Node] Finished "measures", elapsed time 5.039988s.
2025-09-17 07:28:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_segm" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/ds_report_segm".
2025-09-17 07:28:15 | INFO | nipype.workflow | [Node] Executing "ds_report_segm" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:28:15 | INFO | nipype.workflow | [Node] Finished "ds_report_segm", elapsed time 0.004409s.
2025-09-17 07:28:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_noisefit" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/ds_report_noisefit".
2025-09-17 07:28:15 | INFO | nipype.workflow | [Node] Executing "ds_report_noisefit" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:28:15 | INFO | nipype.workflow | [Node] Finished "ds_report_noisefit", elapsed time 0.004487s.
2025-09-17 07:28:15 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_airmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/ds_report_airmask".
2025-09-17 07:28:15 | INFO | nipype.workflow | [Node] Executing "ds_report_airmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:28:15 | INFO | nipype.workflow | [Node] Finished "ds_report_airmask", elapsed time 0.004308s.
2025-09-17 07:28:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.anat_report_wf.ds_report_artmask" in "/tmp/mriqc_wf/anatMRIQC/anat_report_wf/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/ds_report_artmask".
2025-09-17 07:28:16 | INFO | nipype.workflow | [Node] Executing "ds_report_artmask" <mriqc.interfaces.DerivativesDataSink>
2025-09-17 07:28:16 | INFO | nipype.workflow | [Node] Finished "ds_report_artmask", elapsed time 0.004317s.
2025-09-17 07:28:16 | INFO | nipype.workflow | [Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/tmp/mriqc_wf/anatMRIQC/ComputeIQMs/_entities_subject06.suffixT1w.datatypeanat.extension.nii.gz_in_file_..var..lib..condor..execute..dir_2132092..ds..sourcedata..raw..sub-06..anat..sub-06_T1w.nii.gz_metadata_FileSize0.005203457549214363.FileSizeUnitsGB.NumberOfVolumes1/datasink".
2025-09-17 07:28:16 | INFO | nipype.workflow | [Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
2025-09-17 07:28:16 | INFO | nipype.workflow | [Node] Finished "datasink", elapsed time 0.00043s.
2025-09-17 07:28:17 | INFO | nipype.workflow | Generating reports...
2025-09-17 07:28:18 | INFO | nipype.workflow | Report generation finished (4 reports).
2025-09-17 07:28:18 | IMPORTANT | mriqc | Participant level finished successfully averaging 00h 07min 54s per subject.
2025-09-17 07:28:18 | INFO | mriqc | Generating BIDS derivatives metadata.
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MRIQC completed (elapsed time 00h 31min 39s).
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